Gene: Nitab4.5_0001727g0030

General Information

Structural Information

  • Species Nicotiana tabacum
  • Gene Identifier Nitab4.5_0001727g0030
  • Transcript Identifier Nitab4.5_0001727g0030.1
  • Gene Type Coding gene
  • Location Nitab4.5_0001727 : 169846-180067 : negative

Gene Family Information

  • ID HOM05D005583
  • #Genes/#Species 138/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Nitab4.5_0001727g0030.1
  • SR1-identifier Nta04g10650.1

Descriptions

  • Description Helix-hairpin-helix motif, class 2, XPG N-terminal, XPG/Rad2 endonuclease, XPG-I domain, 5'-3' exonuclease, C-terminal domain, XPG conserved site, XPG/Rad2 endonuclease, eukaryotes
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006289
IEA
InterPronucleotide-excision repair
GO:0009408
ISO
PLAZA Integrative Orthologyresponse to heat AT3G28030
GO:0010224
ISO
PLAZA Integrative Orthologyresponse to UV-B AT3G28030
GO:0010213
ISO
PLAZA Integrative Orthologynon-photoreactive DNA repair AT3G28030

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004518
IEA
InterPronuclease activity
GO:0003677
IEA
InterProDNA binding
GO:0003824
IEA
InterProcatalytic activity
GO:0003697
IEA
InterProsingle-stranded DNA binding
GO:0004519
IEA
InterProendonuclease activity
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G28030

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006086 XPG-I domain
IPR006085 XPG, N-terminal
IPR006084 XPG/Rad2 endonuclease
IPR008918 Helix-hairpin-helix motif, class 2
IPR001044 XPG/Rad2 endonuclease, eukaryotes
IPR029060 PIN-like domain superfamily
IPR036279 5'-3' exonuclease, C-terminal domain superfamily
Mapman id Description
14.6.5 DNA damage response.nucleotide excision repair (NER).DNA repair endonuclease (XPG)