Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p06430 Brassica napus
A08p34360 Brassica napus
A09p65320 Brassica napus
Aa31LG1G5230 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_362.2343 Anthoceros agrestis
Actinidia08921 Actinidia chinensis
Actinidia36852 Actinidia chinensis
Ah.10g024860 Amaranthus hybridus
Ah.10g024870 Amaranthus hybridus
AL1G20310 Arabidopsis lyrata
Aqoxy3G01715 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.JCC7XL Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LXGX9H Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UV1K7Q Arachis hypogaea
AT1G09760 Arabidopsis thaliana
ATR0582G093 Amborella trichopoda
Atru.chr12.1486 Acer truncatum
AUR62020276 Chenopodium quinoa
AUR62037729 Chenopodium quinoa
BcaC07g41860 Brassica carinata
BcaC07g41861 Brassica carinata
BolC5t29534H Brassica oleracea
BolC8t48946H Brassica oleracea
BolC8t52462H Brassica oleracea
BraA06t23854Z Brassica rapa
BraA08t35348Z Brassica rapa
BraA09t41876Z Brassica rapa
C05p07830 Brassica napus
C08p13170 Brassica napus
C08p49270 Brassica napus
CAN.G1008.34 Capsicum annuum
CARHR009720 Cardamine hirsuta
Carub.0001s0910 Capsella rubella
Ca_04134_v3 Cicer arietinum L.
CBR_g3778 Chara braunii
Cc04_g05550 Coffea canephora
CDE02G3318 Ceratophyllum demersum
CDE11G0700 Ceratophyllum demersum
Ciclev10028992m.g Citrus clementina
CiPaw.05G096800 Carya illinoinensis
COL.COLO4_24568 Corchorus olitorius
Cpa.g.sc2660.1 Carica papaya
Cpa.g.sc38.27 Carica papaya
Cre16.g679600 Chlamydomonas reinhardtii
CsaV3_6G007610 Cucumis sativus L.
CSS0015612 Camellia sinensis var. sinensis
CSS0017542 Camellia sinensis var. sinensis
CSS0028024 Camellia sinensis var. sinensis
DCAR_021388 Daucus carota
Dinv13692 Davidia involucrata
Duzib264G0012 Durio zibethinus
ECA246G1673 Erigeron canadensis
EL10Ac2g02403 Beta vulgaris
Eucgr.J01697 Eucalyptus grandis
FAN07G2790 Fragaria x ananassa
FAN12G0959 Fragaria x ananassa
FAN17G1337 Fragaria x ananassa
FvH4_4g21991 Fragaria vesca
Glyma.10G123200 Glycine max
Glyma.20G075100 Glycine max
Gohir.A10G154800 Gossypium hirsutum
Gohir.D10G111100 Gossypium hirsutum
Gohir.D11G198700 Gossypium hirsutum
Gohir.D13G071700 Gossypium hirsutum
Gohir.D13G083750 Gossypium hirsutum
Gorai.006G052400 Gossypium raimondii
Gorai.007G212800 Gossypium raimondii
Gorai.010G065400 Gossypium raimondii
Gorai.011G122500 Gossypium raimondii
GSVIVG01001138001 Vitis vinifera
HanXRQChr05g0154501 Helianthus annuus
HanXRQChr06g0174511 Helianthus annuus
Haze_12543 Corylus avellana
HPP92_001926 Vanilla planifolia
Hund15317 Selenicereus undatus
Hund15325 Selenicereus undatus
Lalb_Chr02g0144691 Lupinus albus
Lalb_Chr21g0307771 Lupinus albus
Lj3g0014785 Lotus japonicus
Lj9A489T67 Lonicera japonica
LjContig00470g0019612 Lotus japonicus
Lsat_1_v5_gn_5_9301 Lactuca sativa
Manes.08G098200 Manihot esculenta
Mapoly0014s0064 Marchantia polymorpha
MBI07_g11055_MAGBIO Magnolia biondii
MD13G1135200 Malus domestica
MD16G1130900 Malus domestica
Medtr6g004180 Medicago truncatula
MELO3C022370.2 Cucumis melo
MELO3C026686.2 Cucumis melo
Migut.I00649 Erythranthe guttata
MSTRG.22826 Avicennia marina
Nitab4.5_0000976g0330 Nicotiana tabacum
Nitab4.5_0007669g0040 Nicotiana tabacum
Nn3g16174 Nelumbo nucifera
Oeu027824.1 Olea europaea
Os02g0234800 Oryza sativa ssp. japonica
Peaxi162Scf00314g00830 Petunia axillaris
PGR119G1930 Punica granatum
PGSC0003DMG400014166 Solanum tuberosum
Phvul.003G001500 Phaseolus vulgaris
Phvul.009G235000 Phaseolus vulgaris
Potri.001G072100 Populus trichocarpa
Potri.003G158800 Populus trichocarpa
Pp3c20_1630 Physcomitrium patens
Pp3c23_20060 Physcomitrium patens
Pp3c8_21390 Physcomitrium patens
PRCOL_00001779 Prasinoderma coloniale
Prupe.1G210100 Prunus persica
Psat1g052840 Pisum sativum
PSO017G5587 Papaver somniferum
PSO478G3668 Papaver somniferum
PSO591G0416 Papaver somniferum
RcHm_v2.0_Chr4g0428191 Rosa chinensis
Rhsim12G0182600 Rhododendron simsii
Sabra01G0050700 Salix brachista
Sabra03G0115200 Salix brachista
SalBow7G1334 Salvia bowleyana
Sc04g0000010 Simmondsia chinensis
Sc04g0000070 Simmondsia chinensis
Sed0026884 Sechium edule
SGA_v2.0_scaffold37G14665 Striga asiatica
SGA_v2.0_scaffold5G02818 Striga asiatica
SMO203G0044 Selaginella moellendorffii
Solyc03g117940.3 Solanum lycopersicum
Sopen03g036840 Solanum pennellii
Sp1g08350 Schrenkiella parvula
TAR622G0889 Trochodendron aralioides
THA.LOC104820204 Tarenaya hassleriana
THA.LOC104823693 Tarenaya hassleriana
Thecc.01G236700 Theobroma cacao
Thhalv10008494m.g Eutrema salsugineum
TPR.G25230 Trifolium pratense
TWI36G1055 Tripterygium wilfordii
TWI75G0967 Tripterygium wilfordii
TWI75G1441 Tripterygium wilfordii
unitig_8.g3047 Utricularia gibba
VMungo0251G3521 Vigna mungo
Zm00001eb064600 Zea mays

User provided reference genes

Program Settings