Gene: arahy.Tifrunner.gnm1.ann1.JCC7XL

General Information

Structural Information

Species Arachis hypogaea
Gene Identifier arahy.Tifrunner.gnm1.ann1.JCC7XL
Transcript Identifier arahy.Tifrunner.gnm1.ann1.JCC7XL.1
Gene Type Coding gene
Location arahy.Tifrunner.gnm1.Arahy.04 : 82811080-82815326 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D005498
#Genes/#Species 139/91
Phylogenetic origin

ID ORTHO05D006719
#Genes/#Species 139/90
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

id arahy.Tifrunner.gnm1.ann1.JCC7XL.v1.0
pacid 42666742

Descriptions

Short descriptions
Ortholog descriptions

Description K11092 - U2 small nuclear ribonucleoprotein A' (SNRPA1)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0000398	IEA	InterPro	mRNA splicing, via spliceosome
GO:0009409	ISO	PLAZA Integrative Orthology	response to cold	AT1G09760

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0030620	IEA	InterPro	U2 snRNA binding

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT1G09760
GO:0005737	ISO	PLAZA Integrative Orthology	cytoplasm	AT1G09760
GO:0015030	ISO	PLAZA Integrative Orthology	Cajal body	AT1G09760
GO:0005829	ISO	PLAZA Integrative Orthology	cytosol	AT1G09760
GO:0005730	ISO	PLAZA Integrative Orthology	nucleolus	AT1G09760
GO:0005654	ISO	PLAZA Integrative Orthology	nucleoplasm	AT1G09760

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR044640	U2 small nuclear ribonucleoprotein A'
IPR032675	Leucine-rich repeat domain superfamily
IPR003603	U2A'/phosphoprotein 32 family A, C-terminal

Mapman id	Description
16.2.1.2.1	RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).protein factor (U2A)