Gene: PGSC0003DMG400014166

General Information

Structural Information

Species Solanum tuberosum
Gene Identifier PGSC0003DMG400014166
Transcript Identifier PGSC0003DMT400036729
Gene Type Coding gene
Location ST4.03ch03 : 57610212-57613737 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D005498
#Genes/#Species 139/91
Phylogenetic origin

ID ORTHO05D006719
#Genes/#Species 139/90
Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

pacid 37462867
id PGSC0003DMG400014166.v4.03
uniprot M1B451

Descriptions

Short descriptions
Ortholog descriptions

Description U2 small nuclear ribonucleoprotein A

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0000398	IEA	GOA Database	mRNA splicing, via spliceosome
GO:0000398	IEA	InterPro	mRNA splicing, via spliceosome
GO:0009409	IEA	GOA Database	response to cold

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0030620	IEA	GOA Database	U2 snRNA binding
GO:0030620	IEA	InterPro	U2 snRNA binding

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005730	IEA	GOA Database	nucleolus
GO:0005829	IEA	GOA Database	cytosol
GO:0005654	IEA	GOA Database	nucleoplasm
GO:0005737	IEA	GOA Database	cytoplasm
GO:0005634	IEA	GOA Database	nucleus
GO:0015030	IEA	GOA Database	Cajal body

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR032675	Leucine-rich repeat domain superfamily
IPR044640	U2 small nuclear ribonucleoprotein A'

Mapman id	Description
16.2.1.2.1	RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).protein factor (U2A)