Gene: Ah.10g024870

General Information

Structural Information

Species Amaranthus hybridus
Gene Identifier Ah.10g024870
Transcript Identifier Ah.10g024870-v1.1.a1
Gene Type Coding gene
Location AmaHy_arrow1_Scaffold_10 : 388809-391351 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D005498
#Genes/#Species 139/91
Phylogenetic origin

ID ORTHO05D006719
#Genes/#Species 139/90
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

tid Ah.10g024870-v1.1.a1

Descriptions

Ortholog descriptions

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0000398	IEA	InterPro	mRNA splicing, via spliceosome
GO:0009409	ISO	PLAZA Integrative Orthology	response to cold	AT1G09760

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0030620	IEA	InterPro	U2 snRNA binding

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005634	ISO	PLAZA Integrative Orthology	nucleus	AT1G09760
GO:0005737	ISO	PLAZA Integrative Orthology	cytoplasm	AT1G09760
GO:0015030	ISO	PLAZA Integrative Orthology	Cajal body	AT1G09760
GO:0005829	ISO	PLAZA Integrative Orthology	cytosol	AT1G09760
GO:0005730	ISO	PLAZA Integrative Orthology	nucleolus	AT1G09760
GO:0005654	ISO	PLAZA Integrative Orthology	nucleoplasm	AT1G09760

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR044640	U2 small nuclear ribonucleoprotein A'
IPR025836	Zinc knuckle CX2CX4HX4C
IPR032675	Leucine-rich repeat domain superfamily
IPR025558	Domain of unknown function DUF4283
IPR003603	U2A'/phosphoprotein 32 family A, C-terminal

Mapman id	Description
16.2.1.2.1	RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).protein factor (U2A)