Gene: Pp3c8_21390

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c8_21390
  • Transcript Identifier Pp3c8_21390V3.1
  • Gene Type Coding gene
  • Location Chr08 : 14664400-14667544 : negative

Gene Family Information

  • ID HOM05D005498
  • #Genes/#Species 139/91
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c8_21390V3.1
  • pacid 32964594
  • alias Pp1s134_26V6
  • alias Phypa_17093
  • alias Phpat.008G079700
  • uniprot A0A2K1K894

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
IEA
GOA DatabasemRNA splicing, via spliceosome
GO:0000398
IEA
InterPromRNA splicing, via spliceosome
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT1G09760

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030620
IEA
GOA DatabaseU2 snRNA binding
GO:0030620
IEA
InterProU2 snRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G09760
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT1G09760
GO:0015030
ISO
PLAZA Integrative OrthologyCajal body AT1G09760
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT1G09760
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT1G09760
GO:0005654
ISO
PLAZA Integrative Orthologynucleoplasm AT1G09760

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR044640 U2 small nuclear ribonucleoprotein A'
IPR032675 Leucine-rich repeat domain superfamily
IPR003591 Leucine-rich repeat, typical subtype
Mapman id Description
16.2.1.2.1 RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U2 small nuclear ribonucleoprotein particle (snRNP).protein factor (U2A)