Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p28560 Brassica napus
Aa31LG3G18430 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3544 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_344.4214 Anthoceros agrestis
Actinidia04798 Actinidia chinensis
Actinidia10444 Actinidia chinensis
Ah.11g047420 Amaranthus hybridus
Ah.11g047430 Amaranthus hybridus
AL6G18480 Arabidopsis lyrata
Aqoxy3G00547_Aqoxy3G00548 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.LBS82T Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.N0CKJ9 Arachis hypogaea
AT5G08110 Arabidopsis thaliana
ATR0827G052 Amborella trichopoda
AUR62032136 Chenopodium quinoa
AUR62039669 Chenopodium quinoa
BcaB08g37286 Brassica carinata
BcaB08g37287 Brassica carinata
BolC9t59631H Brassica oleracea
BraA10t44905Z Brassica rapa
C09p68840 Brassica napus
CANSAT80G0202 Cannabis sativa
CARHR205080 Cardamine hirsuta
Carub.0006s0699 Capsella rubella
Ca_02783_v3 Cicer arietinum L.
Ca_02784_v3 Cicer arietinum L.
Ca_02785_v3 Cicer arietinum L.
CBR_g50975 Chara braunii
Cc04_g08300 Coffea canephora
Cfa017734 Carpinus fangiana
Cfa022214 Carpinus fangiana
Ciclev10018555m.g Citrus clementina
CiPaw.15G113700 Carya illinoinensis
ClCG06G015450 Citrullus lanatus
COL.COLO4_27492 Corchorus olitorius
Cpa.g.sc3.237 Carica papaya
Cre03.g187700 Chlamydomonas reinhardtii
CsaV3_1G003350 Cucumis sativus L.
CSS0025897 Camellia sinensis var. sinensis
CSS0043223 Camellia sinensis var. sinensis
DCAR_011574 Daucus carota
Dinv07972 Davidia involucrata
Duzib068G0250 Durio zibethinus
ECA232G2972 Erigeron canadensis
EL10Ac5g11188 Beta vulgaris
Eucgr.K02548 Eucalyptus grandis
FAN08G0483 Fragaria x ananassa
FAN13G2142 Fragaria x ananassa
FAN13G3146 Fragaria x ananassa
FAN18G2313 Fragaria x ananassa
FvH4_5g13410 Fragaria vesca
Glyma.06G206000 Glycine max
Gohir.A11G034000 Gossypium hirsutum
Gohir.D11G037400 Gossypium hirsutum
Gorai.007G040200 Gossypium raimondii
GSVIVG01008151001 Vitis vinifera
HanXRQChr09g0270461 Helianthus annuus
Haze_18509 Corylus avellana
Hma1.2p1_2037F.1_g311970 Hydrangea macrophylla
Hma1.2p1_2037F.1_g311980 Hydrangea macrophylla
Hma1.2p1_2037F.1_g311990 Hydrangea macrophylla
Hma1.2p1_3034F.1_g331880 Hydrangea macrophylla
Hma1.2p1_3034F.1_g331890 Hydrangea macrophylla
HPP92_007735 Vanilla planifolia
Hund09954 Selenicereus undatus
Lalb_Chr11g0071861 Lupinus albus
Lj1g0006842 Lotus japonicus
Lj9A438G54 Lonicera japonica
Lsat_1_v5_gn_1_69000 Lactuca sativa
Lsat_1_v5_gn_2_72741 Lactuca sativa
Lsat_1_v5_gn_2_72781 Lactuca sativa
Lsat_1_v5_gn_4_113721 Lactuca sativa
Manes.06G081200 Manihot esculenta
MBI16_g07042_MAGBIO Magnolia biondii
MCO07G109 Micromonas commoda
MCO09G659 Micromonas commoda
MD14G1216300 Malus domestica
Medtr2g461560 Medicago truncatula
MELO3C017248.2 Cucumis melo
Migut.I00363 Erythranthe guttata
MSTRG.22948 Avicennia marina
Nitab4.5_0002467g0140 Nicotiana tabacum
Nitab4.5_0005994g0060 Nicotiana tabacum
Nn3g17530 Nelumbo nucifera
Oeu005512.2 Olea europaea
Os02g0111900 Oryza sativa ssp. japonica
Os07g0606500 Oryza sativa ssp. japonica
Peaxi162Scf00017g03272 Petunia axillaris
PGR031G2062 Punica granatum
PGSC0003DMG400024525 Solanum tuberosum
Phvul.009G203700 Phaseolus vulgaris
Potri.012G063000 Populus trichocarpa
Potri.012G063201 Populus trichocarpa
Potri.012G063500 Populus trichocarpa
Pp3c5_22230 Physcomitrium patens
Pp3c7_15450 Physcomitrium patens
Pp3c7_15456 Physcomitrium patens
Pp3s405_10 Physcomitrium patens
PRCOL_00000536 Prasinoderma coloniale
Prupe.5G209300 Prunus persica
Prupe.5G209800 Prunus persica
Psat1g126760 Pisum sativum
Psat7g070520 Pisum sativum
PSO478G1652 Papaver somniferum
QL01p024738 Quercus lobata
QL10p020708 Quercus lobata
RcHm_v2.0_Chr7g0183711 Rosa chinensis
RcHm_v2.0_Chr7g0183721 Rosa chinensis
Rhsim08G0141800 Rhododendron simsii
Sc04g0003880 Simmondsia chinensis
Sed0020336 Sechium edule
SEGI_08617 Sequoiadendron giganteum
SEGI_08899 Sequoiadendron giganteum
SEGI_12628 Sequoiadendron giganteum
SEGI_17125 Sequoiadendron giganteum
SEGI_20731 Sequoiadendron giganteum
SEGI_23280 Sequoiadendron giganteum
SEGI_40089 Sequoiadendron giganteum
SGA_v2.0_scaffold25G10948 Striga asiatica
SHI17425 Sapria himalayana
SHI17426 Sapria himalayana
SHI17427 Sapria himalayana
SHI17428 Sapria himalayana
SMO203G0199 Selaginella moellendorffii
Solyc03g114780.3 Solanum lycopersicum
Sopen03g033860 Solanum pennellii
Sp6g34850 Schrenkiella parvula
TAR629G3051 Trochodendron aralioides
THA.LOC104818356 Tarenaya hassleriana
Thecc.03G107700 Theobroma cacao
Thhalv10012480m.g Eutrema salsugineum
TPR.G14357 Trifolium pratense
TWI60G0358 Tripterygium wilfordii
TWI60G1488 Tripterygium wilfordii
vmacro14773 Vaccinium macrocarpon
vmacro17637 Vaccinium macrocarpon
vmacro17638 Vaccinium macrocarpon
vmacro23112 Vaccinium macrocarpon
VMungo1309G0936 Vigna mungo
Zm00001eb327130 Zea mays

User provided reference genes

Program Settings