Gene: vmacro17637

General Information

Structural Information

Species Vaccinium macrocarpon
Gene Identifier vmacro17637
Transcript Identifier vmacro17637-RA
Gene Type Coding gene
Location chr3_Vaccinium_macrocarpon_Stevens_v1 : 20592010-20617020 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D005460
#Genes/#Species 140/93
Phylogenetic origin

ID ORTHO05D008059
#Genes/#Species 124/93
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

id vmacro17637_Vaccinium_macrocarpon_Stevens_v1

Descriptions

Short descriptions
Ortholog descriptions

Description Similar to yprA: Uncharacterized ATP-dependent helicase YprA (Bacillus subtilis (strain 168) OX=224308)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0016070	ISO	PLAZA Integrative Orthology	RNA metabolic process	Solyc03g114780.3
GO:0036297	ISO	PLAZA Integrative Orthology	interstrand cross-link repair	AT5G08110

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0005524	IEA	InterPro	ATP binding
GO:0003724	ISO	PLAZA Integrative Orthology	RNA helicase activity	Solyc03g114780.3

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR001650	Helicase, C-terminal
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR011545	DEAD/DEAH box helicase domain
IPR018973	DEAD/DEAH-box helicase, putative
IPR014001	Helicase superfamily 1/2, ATP-binding domain

Mapman id	Description
13.3.5.5.2.2.3	Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic crossover.class II interference-insensitive crossover pathway.MUS81-independent pathway.crosslink repair helicase (HRQ1)