Gene: Pp3c5_22230

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c5_22230
  • Transcript Identifier Pp3c5_22230V3.1
  • Gene Type Coding gene
  • Location Chr05 : 15431632-15440583 : positive

Gene Family Information

  • ID HOM05D005460
  • #Genes/#Species 140/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c5_22230V3.1
  • pacid 32953769
  • alias Pp1s23_24V6
  • alias Phpat.005G082000
  • uniprot A0A2K1KKP2

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032508
IEA
GOA DatabaseDNA duplex unwinding
GO:0006289
IBA
GOA Databasenucleotide-excision repair
GO:0016070
ISO
PLAZA Integrative OrthologyRNA metabolic process Solyc03g114780.3
GO:0036297
ISO
PLAZA Integrative Orthologyinterstrand cross-link repair AT5G08110

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0043138
IBA
GOA Database3'-5' DNA helicase activity
GO:0003724
ISO
PLAZA Integrative OrthologyRNA helicase activity Solyc03g114780.3

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR029071 Ubiquitin-like domain superfamily
IPR011545 DEAD/DEAH box helicase domain
IPR001650 Helicase, C-terminal
IPR018973 DEAD/DEAH-box helicase, putative
Mapman id Description
13.3.5.5.2.2.3 Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic crossover.class II interference-insensitive crossover pathway.MUS81-independent pathway.crosslink repair helicase (HRQ1)