Gene: FAN08G0483

General Information

Structural Information

  • Species Fragaria x ananassa
  • Gene Identifier FAN08G0483
  • Transcript Identifier FAN08G0483.1
  • Gene Type Coding gene
  • Location Fvb5-3 : 20645409-20653053 : negative

Gene Family Information

  • ID HOM05D005460
  • #Genes/#Species 140/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id maker-Fvb5-3-snap-gene-206.63.v1.0.a1
  • pacid 50462681

Descriptions

  • Description PF00270//PF00271//PF09369 - DEAD/DEAH box helicase (DEAD) // Helicase conserved C-terminal domain (Helicase_C) // Domain of unknown function (DUF1998) (DUF1998)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016070
ISO
PLAZA Integrative OrthologyRNA metabolic process Solyc03g114780.3
GO:0036297
ISO
PLAZA Integrative Orthologyinterstrand cross-link repair AT5G08110

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
IEA
InterProATP binding
GO:0003724
ISO
PLAZA Integrative OrthologyRNA helicase activity Solyc03g114780.3

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR029071 Ubiquitin-like domain superfamily
IPR018973 DEAD/DEAH-box helicase, putative
IPR001650 Helicase, C-terminal
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR011545 DEAD/DEAH box helicase domain
Mapman id Description
13.3.5.5.2.2.3 Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic crossover.class II interference-insensitive crossover pathway.MUS81-independent pathway.crosslink repair helicase (HRQ1)