Gene: vmacro23112
General Information
Structural Information
- Species Vaccinium macrocarpon
- Gene Identifier vmacro23112
- Transcript Identifier vmacro23112-RA
- Gene Type Coding gene
- Location scaffold00563_Vaccinium_macrocarpon_Stevens_v1 : 130-17041 : positive
Gene Family Information
- ID HOM05D005460
- #Genes/#Species 140/93
- Phylogenetic origin
- ID ORTHO05D008059
- #Genes/#Species 124/93
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id vmacro23112_Vaccinium_macrocarpon_Stevens_v1
Descriptions
- Description Similar to hrq1: ATP-dependent helicase hrq1 (Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016070 | ISO | PLAZA Integrative Orthology | RNA metabolic process | Solyc03g114780.3 |
| GO:0036297 | ISO | PLAZA Integrative Orthology | interstrand cross-link repair | AT5G08110 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | ISO | PLAZA Homology (enrichment) | nucleic acid binding | HOM05D005460 |
| GO:0005524 | ISO | PLAZA Homology (enrichment) | ATP binding | HOM05D005460 |
| GO:0003724 | ISO | PLAZA Integrative Orthology | RNA helicase activity | Solyc03g114780.3 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR018973 | DEAD/DEAH-box helicase, putative |
| Mapman id | Description |
|---|---|
| 13.3.5.5.2.2.3 | Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic crossover.class II interference-insensitive crossover pathway.MUS81-independent pathway.crosslink repair helicase (HRQ1) |