Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p20990 Brassica napus
Aa31LG4G15310 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_228.4701 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_369.362 Anthoceros agrestis
Actinidia30274 Actinidia chinensis
Ah.15g099330 Amaranthus hybridus
AL1G56380 Arabidopsis lyrata
AL2G32490 Arabidopsis lyrata
AL5G25000 Arabidopsis lyrata
AL6G48610 Arabidopsis lyrata
AL9U12120 Arabidopsis lyrata
Aqoxy4G02391 Aquilegia oxysepala
Aqoxy5G03197 Aquilegia oxysepala
Aqoxy7G01494 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.WUZH4U Arachis hypogaea
AT2G07110 Arabidopsis thaliana
AT3G46210 Arabidopsis thaliana
ATR0705G208 Amborella trichopoda
Atru.chr7.2095 Acer truncatum
Atru.chr7.2109 Acer truncatum
AUR62009295 Chenopodium quinoa
AUR62041709 Chenopodium quinoa
AUR62043392 Chenopodium quinoa
BcaC01g01925 Brassica carinata
BolC3t19335H Brassica oleracea
BraA06t25187Z Brassica rapa
C03p70530 Brassica napus
CAN.G1674.2 Capsicum annuum
CANSAT11G2394 Cannabis sativa
CARHR154650 Cardamine hirsuta
Carub.0005s1205 Capsella rubella
Ca_07899_v3 Cicer arietinum L.
CBR_g16978 Chara braunii
Cc08_g09460 Coffea canephora
CDE02G3559 Ceratophyllum demersum
Cfa013314 Carpinus fangiana
Ciclev10009310m.g Citrus clementina
Ciclev10010872m.g Citrus clementina
CiPaw.11G052500 Carya illinoinensis
ClCG08G012270 Citrullus lanatus
COL.COLO4_17864 Corchorus olitorius
COL.COLO4_20965 Corchorus olitorius
Cre14.g624500 Chlamydomonas reinhardtii
CsaV3_2G030910 Cucumis sativus L.
CSS0003070 Camellia sinensis var. sinensis
CSS0010535 Camellia sinensis var. sinensis
DCAR_004475 Daucus carota
Dinv14260 Davidia involucrata
Dinv27896 Davidia involucrata
Duzib150G1530 Durio zibethinus
Duzib168G0626 Durio zibethinus
ECA248G2598 Erigeron canadensis
EL10Ac2g04031 Beta vulgaris
Eucgr.C02924 Eucalyptus grandis
FAN09G0664 Fragaria x ananassa
FAN15G2140 Fragaria x ananassa
FAN20G1449 Fragaria x ananassa
FAN27G1436 Fragaria x ananassa
FAN28G1291 Fragaria x ananassa
FvH4_2g35660 Fragaria vesca
Glyma.09G261100 Glycine max
Glyma.17G169500 Glycine max
Glyma.18G230900 Glycine max
Gohir.1Z049557 Gossypium hirsutum
Gohir.A06G093501 Gossypium hirsutum
Gohir.A13G186200 Gossypium hirsutum
Gohir.D06G093150 Gossypium hirsutum
Gohir.D13G193000 Gossypium hirsutum
Gorai.010G107600 Gossypium raimondii
Gorai.013G218900 Gossypium raimondii
GSVIVG01008243001 Vitis vinifera
GSVIVG01035631001 Vitis vinifera
HanXRQChr01g0029811 Helianthus annuus
Haze_21802 Corylus avellana
Hma1.2p1_0049F.1_g028670 Hydrangea macrophylla
Hma1.2p1_0049F.1_g028680 Hydrangea macrophylla
Hma1.2p1_0049F.1_g028690 Hydrangea macrophylla
Hma1.2p1_0184F.1_g081320 Hydrangea macrophylla
Hma1.2p1_0774F.1_g216280 Hydrangea macrophylla
Hma1.2p1_0774F.1_g216360 Hydrangea macrophylla
Hma1.2p1_0774F.1_g216370 Hydrangea macrophylla
HPP92_018407 Vanilla planifolia
Hund19520 Selenicereus undatus
Lalb_Chr08g0233831 Lupinus albus
Lj1g0020257 Lotus japonicus
Lj2g0027256 Lotus japonicus
Lj8C577G3 Lonicera japonica
Lj8C586G3 Lonicera japonica
Lsat_1_v5_gn_1_47181 Lactuca sativa
Manes.01G107300 Manihot esculenta
Mapoly0050s0095 Marchantia polymorpha
MBI04_g27064_MAGBIO Magnolia biondii
MBI18_g28913_MAGBIO Magnolia biondii
MCO03G324 Micromonas commoda
MD01G1039900 Malus domestica
MD15G1311800 Malus domestica
Medtr7g076910 Medicago truncatula
MELO3C011145.2 Cucumis melo
Migut.A00211 Erythranthe guttata
MSTRG.11700 Avicennia marina
Nitab4.5_0007810g0010 Nicotiana tabacum
Nitab4.5_0007838g0040 Nicotiana tabacum
Nn7g37002 Nelumbo nucifera
Os03g0854200 Oryza sativa ssp. japonica
Peaxi162Scf00227g00213 Petunia axillaris
PGR044G2490 Punica granatum
PGSC0003DMG400004310 Solanum tuberosum
Phvul.008G066200 Phaseolus vulgaris
Potri.006G239100 Populus trichocarpa
Potri.018G043600 Populus trichocarpa
Pp3c4_10290 Physcomitrium patens
Prupe.1G449000 Prunus persica
Psat0s4355g0080 Pisum sativum
Psat0s4355g0120 Pisum sativum
Psat3g109920 Pisum sativum
Psat3g124840 Pisum sativum
PSO566G0264 Papaver somniferum
PSO782G3154 Papaver somniferum
QL12p029089 Quercus lobata
RcHm_v2.0_Chr6g0305271 Rosa chinensis
RcHm_v2.0_Chr6g0306141 Rosa chinensis
Rhsim02G0179100 Rhododendron simsii
Sabra18G0043700 Salix brachista
SalBow4G1104 Salvia bowleyana
Sc09g0009230 Simmondsia chinensis
Sed0006550 Sechium edule
SEGI_05611 Sequoiadendron giganteum
SGA_v2.0_scaffold75G25007 Striga asiatica
Solyc08g066700.3 Solanum lycopersicum
Sopen08g020660 Solanum pennellii
Sp5g15420 Schrenkiella parvula
TAR383G0707 Trochodendron aralioides
TAR626G1708 Trochodendron aralioides
TAR636G0460 Trochodendron aralioides
THA.LOC104814772 Tarenaya hassleriana
Thecc.09G044300 Theobroma cacao
Thhalv10002689m.g Eutrema salsugineum
Thhalv10002814m.g Eutrema salsugineum
TPR.G26940 Trifolium pratense
TPR.G28486 Trifolium pratense
TWI32G0813 Tripterygium wilfordii
vmacro11061 Vaccinium macrocarpon
vmacro11062 Vaccinium macrocarpon
Zm00001eb210560 Zea mays
Zm00001eb340110 Zea mays

User provided reference genes

Program Settings