Gene: Sopen08g020660

General Information

Structural Information

  • Species Solanum pennellii
  • Gene Identifier Sopen08g020660
  • Transcript Identifier Sopen08g020660.1
  • Gene Type Coding gene
  • Location Spenn-ch08 : 59652549-59654906 : positive

Gene Family Information

  • ID HOM05D005175
  • #Genes/#Species 145/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Sopen08g020660.1

Descriptions

  • Description Ribosomal protein S5 domain 2-like superfamily protein | FUNCTIONS IN: 3-5-exoribonuclease activity, RNA binding | INVOLVED IN: RNA processing | LOCATED IN: cellular_component unknown | EXPRESSED IN: 20 plant structures | EXPRESSED DURING: 13 growth stages | CONTAINS InterPro DOMAIN/s: Exoribonuclease, phosphorolytic domain 1 , Ribosomal protein S5 domain 2-type fold | BEST Arabidopsis thaliana protein match is: unknown protein .
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Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042802
ISO
PLAZA Integrative Orthologyidentical protein binding Os03g0854200
GO:0004536
ISO
PLAZA Integrative Orthologydeoxyribonuclease activity Os03g0854200
GO:0003727
ISO
PLAZA Integrative Orthologysingle-stranded RNA binding Os03g0854200
GO:0003690
ISO
PLAZA Integrative Orthologydouble-stranded DNA binding Os03g0854200
GO:0004540
ISO
PLAZA Integrative Orthologyribonuclease activity Os03g0854200

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR020568 Ribosomal protein S5 domain 2-type fold
IPR027408 PNPase/RNase PH domain superfamily
IPR001247 Exoribonuclease, phosphorolytic domain 1
Mapman id Description
16.4.1.1.6 RNA processing.RNA surveillance.exosome complex.EXO9 core complex.component RRP46