Gene: AL5G25000

General Information

Structural Information

  • Species Arabidopsis lyrata
  • Gene Identifier AL5G25000
  • Transcript Identifier AL5G25000.t1
  • Gene Type Coding gene
  • Location scaffold_5 : 12461924-12463575 : negative

Gene Family Information

  • ID HOM05D005175
  • #Genes/#Species 145/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id AL5G25000.v2.1
  • synonym 485002
  • synonym fgenesh2_kg.5__994__AT3G46210.3
  • pacid 35921231

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042802
ISO
PLAZA Integrative Orthologyidentical protein binding Os03g0854200
GO:0004536
ISO
PLAZA Integrative Orthologydeoxyribonuclease activity Os03g0854200
GO:0003727
ISO
PLAZA Integrative Orthologysingle-stranded RNA binding Os03g0854200
GO:0003690
ISO
PLAZA Integrative Orthologydouble-stranded DNA binding Os03g0854200
GO:0004540
ISO
PLAZA Integrative Orthologyribonuclease activity Os03g0854200

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036345 Exoribonuclease, PH domain 2 superfamily
IPR027408 PNPase/RNase PH domain superfamily
IPR020568 Ribosomal protein S5 domain 2-type fold
IPR001247 Exoribonuclease, phosphorolytic domain 1
Mapman id Description
16.4.1.1.6 RNA processing.RNA surveillance.exosome complex.EXO9 core complex.component RRP46