Gene: vmacro11061

General Information

Structural Information

Species Vaccinium macrocarpon
Gene Identifier vmacro11061
Transcript Identifier vmacro11061-RA
Gene Type Coding gene
Location chr8_Vaccinium_macrocarpon_Stevens_v1 : 25024228-25030072 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D005175
#Genes/#Species 145/93
Phylogenetic origin

ID ORTHO05D006302
#Genes/#Species 144/93
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

id vmacro11061_Vaccinium_macrocarpon_Stevens_v1

Descriptions

Short descriptions
Ortholog descriptions

Description Similar to RRP46: Exosome complex exonuclease RRP46 homolog (Arabidopsis thaliana OX=3702)

Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0042802	ISO	PLAZA Integrative Orthology	identical protein binding	Os03g0854200
GO:0004536	ISO	PLAZA Integrative Orthology	deoxyribonuclease activity	Os03g0854200
GO:0003727	ISO	PLAZA Integrative Orthology	single-stranded RNA binding	Os03g0854200
GO:0003690	ISO	PLAZA Integrative Orthology	double-stranded DNA binding	Os03g0854200
GO:0004540	ISO	PLAZA Integrative Orthology	ribonuclease activity	Os03g0854200

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR020568	Ribosomal protein S5 domain 2-type fold
IPR001247	Exoribonuclease, phosphorolytic domain 1
IPR027408	PNPase/RNase PH domain superfamily

Mapman id	Description
16.4.1.1.6	RNA processing.RNA surveillance.exosome complex.EXO9 core complex.component RRP46