Gene: PGR044G2490

General Information

Structural Information

  • Species Punica granatum
  • Gene Identifier PGR044G2490
  • Transcript Identifier PGR044G2490.01
  • Gene Type Coding gene
  • Location NC_045134.1 : 6839977-6842337 : positive

Gene Family Information

  • ID HOM05D005175
  • #Genes/#Species 145/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pid XP_031407495.1
  • name LOC116215849
  • name XM_031551635.1
  • id gene-LOC116215849
  • uniprot A0A6P8EBV2

Descriptions

  • product exosome complex exonuclease RRP46 homolog, transcript variant X1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004527
IEA
GOA Databaseexonuclease activity
GO:0042802
ISO
PLAZA Integrative Orthologyidentical protein binding Os03g0854200
GO:0004536
ISO
PLAZA Integrative Orthologydeoxyribonuclease activity Os03g0854200
GO:0003727
ISO
PLAZA Integrative Orthologysingle-stranded RNA binding Os03g0854200
GO:0003690
ISO
PLAZA Integrative Orthologydouble-stranded DNA binding Os03g0854200
GO:0004540
ISO
PLAZA Integrative Orthologyribonuclease activity Os03g0854200

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036345 Exoribonuclease, PH domain 2 superfamily
IPR027408 PNPase/RNase PH domain superfamily
IPR001247 Exoribonuclease, phosphorolytic domain 1
IPR020568 Ribosomal protein S5 domain 2-type fold
Mapman id Description
16.4.1.1.6 RNA processing.RNA surveillance.exosome complex.EXO9 core complex.component RRP46