Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A10p31210 Brassica napus
Aa31LG11G5780 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_117.426 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_369.516 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_369.549 Anthoceros agrestis
Actinidia17467 Actinidia chinensis
Ah.04g162660 Amaranthus hybridus
AL6G14620 Arabidopsis lyrata
Aqoxy1G01331 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.PFS9H6 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.Q8TWNW Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UR2VUR Arachis hypogaea
AT5G04920 Arabidopsis thaliana
ATR0068G025 Amborella trichopoda
ATR0068G114 Amborella trichopoda
Atru.chr12.1229 Acer truncatum
AUR62014307 Chenopodium quinoa
AUR62034100 Chenopodium quinoa
BcaB01g02418 Brassica carinata
BcaB04g17834 Brassica carinata
BcaC03g13138 Brassica carinata
BcaC06g32201 Brassica carinata
BolC2t06178H Brassica oleracea
BolC9t59932H Brassica oleracea
BraA10t45165Z Brassica rapa
C09p71830 Brassica napus
CAN.G134.53 Capsicum annuum
CAN.G134.55 Capsicum annuum
CANSAT56G0938 Cannabis sativa
CARHR208340 Cardamine hirsuta
Carub.0006s0386 Capsella rubella
Carub.0010s0002 Capsella rubella
Ca_12171_v3 Cicer arietinum L.
CBR_g40666 Chara braunii
Cc02_g32050 Coffea canephora
CDE02G4629 Ceratophyllum demersum
CDE04G0393 Ceratophyllum demersum
Cfa010450 Carpinus fangiana
Cfa024879 Carpinus fangiana
Ciclev10015236m.g Citrus clementina
CiPaw.13G047200 Carya illinoinensis
ClCG08G010780 Citrullus lanatus
COL.COLO4_28905 Corchorus olitorius
Cpa.g.c41130 Carica papaya
Cpa.g.sc54.64 Carica papaya
Cpa.g.sc54.66 Carica papaya
Cre03.g159750 Chlamydomonas reinhardtii
CsaV3_6G035780 Cucumis sativus L.
CSS0030945 Camellia sinensis var. sinensis
DCAR_023093 Daucus carota
Dinv24594 Davidia involucrata
Duzib106G0431 Durio zibethinus
ECA246G4563 Erigeron canadensis
EL10Ac4g08774 Beta vulgaris
Eucgr.G02641 Eucalyptus grandis
FAN01G0635 Fragaria x ananassa
FAN03G2277 Fragaria x ananassa
FAN07G2641 Fragaria x ananassa
FAN12G0991 Fragaria x ananassa
FAN12G2325 Fragaria x ananassa
FAN17G1198 Fragaria x ananassa
FvH4_4g11870 Fragaria vesca
FvH4_7g05040 Fragaria vesca
Glyma.08G228000 Glycine max
Glyma.15G221000 Glycine max
Gohir.A09G246100 Gossypium hirsutum
Gohir.A11G310500 Gossypium hirsutum
Gohir.D09G246700 Gossypium hirsutum
Gohir.D13G181800 Gossypium hirsutum
Gohir.D13G182000 Gossypium hirsutum
Gorai.004G275700 Gossypium raimondii
Gorai.006G271200 Gossypium raimondii
Gorai.013G207400 Gossypium raimondii
Gorai.013G207600 Gossypium raimondii
GSVIVG01010707001 Vitis vinifera
GSVIVG01027217001 Vitis vinifera
HanXRQChr06g0174201 Helianthus annuus
Haze_03404 Corylus avellana
Hma1.2p1_0327F.1_g126320 Hydrangea macrophylla
Hma1.2p1_0327F.1_g126330 Hydrangea macrophylla
Hma1.2p1_0327F.1_g126340 Hydrangea macrophylla
HPP92_019772 Vanilla planifolia
Hund06827 Selenicereus undatus
Lalb_Chr03g0032361 Lupinus albus
Lalb_Chr19g0132531 Lupinus albus
Lj3g0016494 Lotus japonicus
Lj7C543G12 Lonicera japonica
Lsat_1_v5_gn_3_25820 Lactuca sativa
Manes.07G084100 Manihot esculenta
Mapoly0072s0023 Marchantia polymorpha
MBI14_g16397_MAGBIO Magnolia biondii
MBI19_g30303_MAGBIO Magnolia biondii
MCO16G624 Micromonas commoda
MD02G1263600 Malus domestica
MD07G1054600 Malus domestica
MD12G1098600 Malus domestica
Medtr8g044150 Medicago truncatula
MELO3C011385.2 Cucumis melo
Migut.N01878 Erythranthe guttata
Migut.O00436 Erythranthe guttata
MSTRG.5085 Avicennia marina
Nitab4.5_0005056g0010 Nicotiana tabacum
Nn2g14693 Nelumbo nucifera
Nn2g14694 Nelumbo nucifera
Oeu058668.1 Olea europaea
Os01g0813500 Oryza sativa ssp. japonica
Peaxi162Scf00647g00319 Petunia axillaris
PGR142G4466 Punica granatum
PGSC0003DMG400027500 Solanum tuberosum
Phvul.011G187600 Phaseolus vulgaris
Potri.010G246400 Populus trichocarpa
Pp3c23_21630 Physcomitrium patens
PRCOL_00005700 Prasinoderma coloniale
Prupe.2G061300 Prunus persica
Psat0s3059g0040 Pisum sativum
PSO339G6394 Papaver somniferum
QL04p050393 Quercus lobata
RcHm_v2.0_Chr1g0331361 Rosa chinensis
Rhsim01G0121200 Rhododendron simsii
Sabra08G0007600 Salix brachista
SalBow4G1949 Salvia bowleyana
Sc09g0004900 Simmondsia chinensis
Sed0016259 Sechium edule
Sed0022214 Sechium edule
SEGI_09620 Sequoiadendron giganteum
SEGI_10345 Sequoiadendron giganteum
SGA_v2.0_scaffold196G40993 Striga asiatica
SHI05402 Sapria himalayana
SHI21243 Sapria himalayana
SMO011G0007 Selaginella moellendorffii
Solyc01g096910.3 Solanum lycopersicum
Sopen01g040620 Solanum pennellii
Sp6g37880 Schrenkiella parvula
TAR633G2177 Trochodendron aralioides
THA.LOC104816483 Tarenaya hassleriana
Thecc.10G129400 Theobroma cacao
Thhalv10013568m.g Eutrema salsugineum
TPR.G35740 Trifolium pratense
TWI15G0704 Tripterygium wilfordii
TWI38G0882 Tripterygium wilfordii
unitig_749.g13551 Utricularia gibba
vmacro20844 Vaccinium macrocarpon
VMungo1127G0494 Vigna mungo
VMungo1127G1160 Vigna mungo
Zm00001eb149970 Zea mays
Zm00001eb369140 Zea mays

User provided reference genes

Program Settings