Gene: FAN17G1198
General Information
Structural Information
- Species Fragaria x ananassa
- Gene Identifier FAN17G1198
- Transcript Identifier FAN17G1198.1
- Gene Type Coding gene
- Location Fvb4-2 : 14634711-14640525 : negative
Gene Family Information
- ID HOM05D005149
- #Genes/#Species 146/100
- Phylogenetic origin
- ID ORTHO05D006251
- #Genes/#Species 145/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id maker-Fvb4-2-augustus-gene-146.19.v1.0.a1
- pacid 50531856
Descriptions
- Description K12190 - ESCRT-II complex subunit VPS36 (VPS36, EAP45)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0032509 | IEA | InterPro | endosome transport via multivesicular body sorting pathway | |
| GO:0007033 | ISO | PLAZA Integrative Orthology | vacuole organization | AT5G04920 |
| GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT5G04920 |
| GO:0090351 | ISO | PLAZA Integrative Orthology | seedling development | AT5G04920 |
| GO:0071985 | ISO | PLAZA Integrative Orthology | multivesicular body sorting pathway | AT5G04920 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0043130 | IEA | InterPro | ubiquitin binding | |
| GO:0032266 | IEA | InterPro | phosphatidylinositol-3-phosphate binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G04920 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000814 | IEA | InterPro | ESCRT II complex | |
| GO:0005769 | ISO | PLAZA Integrative Orthology | early endosome | AT5G04920 |
| GO:0005770 | ISO | PLAZA Integrative Orthology | late endosome | AT5G04920 |
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT5G04920 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR040608 | Snf8/Vps36 family |
| IPR011993 | PH-like domain superfamily |
| IPR036388 | Winged helix-like DNA-binding domain superfamily |
| IPR036390 | Winged helix DNA-binding domain superfamily |
| IPR037855 | Vacuolar protein sorting protein 36 |
| IPR021648 | Vacuolar protein sorting protein 36, GLUE domain |
| Mapman id | Description |
|---|---|
| 22.4.1.2.3 | Vesicle trafficking.endocytic trafficking.ESCRT-mediated sorting.ESCRT-II complex.component VPS36 |