Gene: Potri.010G246400

General Information

Structural Information

  • Species Populus trichocarpa
  • Gene Identifier Potri.010G246400
  • Transcript Identifier Potri.010G246400.1
  • Gene Type Coding gene
  • Location Chr10 : 22128142-22131572 : negative

Gene Family Information

  • ID HOM05D005149
  • #Genes/#Species 146/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Potri.010G246400.v4.1
  • pacid 42799484
  • synonym estExt_fgenesh4_pm.C_LG_X0978

Descriptions

  • Description K12190 - ESCRT-II complex subunit VPS36 (VPS36, EAP45)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032509
IEA
InterProendosome transport via multivesicular body sorting pathway
GO:0007033
ISO
PLAZA Integrative Orthologyvacuole organization AT5G04920
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT5G04920
GO:0090351
ISO
PLAZA Integrative Orthologyseedling development AT5G04920
GO:0071985
ISO
PLAZA Integrative Orthologymultivesicular body sorting pathway AT5G04920

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032266
IEA
InterProphosphatidylinositol-3-phosphate binding
GO:0043130
IEA
InterProubiquitin binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G04920

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000814
IEA
InterProESCRT II complex
GO:0005769
ISO
PLAZA Integrative Orthologyearly endosome AT5G04920
GO:0005770
ISO
PLAZA Integrative Orthologylate endosome AT5G04920
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT5G04920

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011993 PH-like domain superfamily
IPR040608 Snf8/Vps36 family
IPR036390 Winged helix DNA-binding domain superfamily
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR021648 Vacuolar protein sorting protein 36, GLUE domain
IPR037855 Vacuolar protein sorting protein 36
Mapman id Description
22.4.1.2.3 Vesicle trafficking.endocytic trafficking.ESCRT-mediated sorting.ESCRT-II complex.component VPS36