Gene: CiPaw.13G047200

General Information

Structural Information

  • Species Carya illinoinensis
  • Gene Identifier CiPaw.13G047200
  • Transcript Identifier CiPaw.13G047200.1
  • Gene Type Coding gene
  • Location Chr13 : 4634181-4638723 : negative

Gene Family Information

  • ID HOM05D005149
  • #Genes/#Species 146/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id CiPaw.13G047200.v1.1
  • pacid 45813487
  • locus Caril.13G046000

Descriptions

  • Description K12190 - ESCRT-II complex subunit VPS36 (VPS36, EAP45)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032509
IEA
InterProendosome transport via multivesicular body sorting pathway
GO:0007033
ISO
PLAZA Integrative Orthologyvacuole organization AT5G04920
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT5G04920
GO:0090351
ISO
PLAZA Integrative Orthologyseedling development AT5G04920
GO:0071985
ISO
PLAZA Integrative Orthologymultivesicular body sorting pathway AT5G04920

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043130
IEA
InterProubiquitin binding
GO:0032266
IEA
InterProphosphatidylinositol-3-phosphate binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G04920

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000814
IEA
InterProESCRT II complex
GO:0005769
ISO
PLAZA Integrative Orthologyearly endosome AT5G04920
GO:0005770
ISO
PLAZA Integrative Orthologylate endosome AT5G04920
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT5G04920

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR037855 Vacuolar protein sorting protein 36
IPR036390 Winged helix DNA-binding domain superfamily
IPR011993 PH-like domain superfamily
IPR021648 Vacuolar protein sorting protein 36, GLUE domain
IPR040608 Snf8/Vps36 family
Mapman id Description
22.4.1.2.3 Vesicle trafficking.endocytic trafficking.ESCRT-mediated sorting.ESCRT-II complex.component VPS36