Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
Aa31LG8G7300 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.3443 Anthoceros agrestis
Actinidia35358 Actinidia chinensis
AL3G33270 Arabidopsis lyrata
AL3G33310 Arabidopsis lyrata
AL3G34200 Arabidopsis lyrata
Aqoxy1G03129 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.E8M5A0 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.ZUJ4QN Arachis hypogaea
AT3G20475 Arabidopsis thaliana
ATR0794G119 Amborella trichopoda
Atru.chr1.2791 Acer truncatum
AUR62015808 Chenopodium quinoa
AUR62020409 Chenopodium quinoa
BcaC05g28338 Brassica carinata
BcaNung06350 Brassica carinata
BolC5t33100H Brassica oleracea
BraA05t21720Z Brassica rapa
CAN.G1568.1 Capsicum annuum
CANSAT11G0463 Cannabis sativa
CARHR096230 Cardamine hirsuta
Carub.0003s2042 Capsella rubella
Ca_06330_v3 Cicer arietinum L.
Ca_30701_v3 Cicer arietinum L.
CBR_g24261 Chara braunii
Cc05_g13960 Coffea canephora
Cfa020320 Carpinus fangiana
Ciclev10010304m.g Citrus clementina
CiPaw.11G191700 Carya illinoinensis
ClCG10G004940 Citrullus lanatus
COL.COLO4_09681 Corchorus olitorius
COL.COLO4_09682 Corchorus olitorius
Cpa.g.sc12.282 Carica papaya
Cpa.g.sc12.283 Carica papaya
Cre17.g713650 Chlamydomonas reinhardtii
CsaV3_3G004590 Cucumis sativus L.
CSS0008695 Camellia sinensis var. sinensis
CSS0026270 Camellia sinensis var. sinensis
CSS0035479 Camellia sinensis var. sinensis
CSS0037829 Camellia sinensis var. sinensis
CSS0047944 Camellia sinensis var. sinensis
DCAR_009454 Daucus carota
Dinv40770 Davidia involucrata
Duzib213G0327 Durio zibethinus
ECA240G2090 Erigeron canadensis
EL10Ac4g07775 Beta vulgaris
Eucgr.F00744 Eucalyptus grandis
FAN11G0321 Fragaria x ananassa
FAN16G3602 Fragaria x ananassa
FAN21G3129 Fragaria x ananassa
FAN25G1090 Fragaria x ananassa
FAN25G1441 Fragaria x ananassa
FAN25G2375 Fragaria x ananassa
FvH4_3g23000 Fragaria vesca
Glyma.02G292202 Glycine max
Glyma.14G022400 Glycine max
Gohir.A04G013900 Gossypium hirsutum
Gohir.D05G372400 Gossypium hirsutum
Gorai.009G440600 Gossypium raimondii
Gorai.009G440700 Gossypium raimondii
GSVIVG01037674001 Vitis vinifera
HanXRQChr03g0079751 Helianthus annuus
HanXRQChr03g0079771 Helianthus annuus
HanXRQChr03g0079791 Helianthus annuus
HanXRQChr03g0079801 Helianthus annuus
HanXRQChr05g0152621 Helianthus annuus
Haze_09701 Corylus avellana
Hma1.2p1_0036F.1_g023490 Hydrangea macrophylla
Hma1.2p1_0036F.1_g023500 Hydrangea macrophylla
HPP92_001589 Vanilla planifolia
HPP92_001590 Vanilla planifolia
HPP92_001598 Vanilla planifolia
HPP92_001599 Vanilla planifolia
HPP92_001600 Vanilla planifolia
Hund02015 Selenicereus undatus
Lalb_Chr04g0248341 Lupinus albus
Lj1C874G10 Lonicera japonica
Lj1C875G1 Lonicera japonica
LjContig00272g0019234 Lotus japonicus
Lsat_1_v5_gn_4_50920 Lactuca sativa
Lsat_1_v5_gn_9_90520 Lactuca sativa
Manes.03G131500 Manihot esculenta
Mapoly0055s0066 Marchantia polymorpha
MBI18_g22342_MAGBIO Magnolia biondii
MBI18_g26501_MAGBIO Magnolia biondii
MCO03G358 Micromonas commoda
MD11G1214700 Malus domestica
Medtr5g093110 Medicago truncatula
MELO3C032293.2 Cucumis melo
Migut.M01745 Erythranthe guttata
MSTRG.6931 Avicennia marina
MSTRG.6932 Avicennia marina
Nitab4.5_0000882g0070 Nicotiana tabacum
Nitab4.5_0000882g0080 Nicotiana tabacum
Nitab4.5_0007776g0010 Nicotiana tabacum
Nitab4.5_0007776g0020 Nicotiana tabacum
Nn1g03486 Nelumbo nucifera
Oeu062583.1 Olea europaea
Os05g0498300 Oryza sativa ssp. japonica
Peaxi162Scf00350g00215 Petunia axillaris
Peaxi162Scf00350g00216 Petunia axillaris
PGR083G0916 Punica granatum
PGR083G2184 Punica granatum
PGR083G2502 Punica granatum
Phvul.008G268900 Phaseolus vulgaris
Potri.011G089500 Populus trichocarpa
Pp3c17_9120 Physcomitrium patens
Pp3c2_9530 Physcomitrium patens
PRCOL_00007247 Prasinoderma coloniale
Prupe.4G216500 Prunus persica
Psat2g012000 Pisum sativum
PSO541G0855 Papaver somniferum
QL08p009451 Quercus lobata
QL08p009463 Quercus lobata
RcHm_v2.0_Chr5g0040391 Rosa chinensis
RcHm_v2.0_Chr5g0040451 Rosa chinensis
RhsimUnG0249000 Rhododendron simsii
Sabra11G0073600 Salix brachista
Sabra11G0079200 Salix brachista
Sc16g0005920 Simmondsia chinensis
Sed0003845 Sechium edule
SEGI_15895 Sequoiadendron giganteum
SGA_v2.0_scaffold36G14386 Striga asiatica
SHI26594 Sapria himalayana
SMO340G0188 Selaginella moellendorffii
Solyc10g018530.2 Solanum lycopersicum
Solyc10g018540.2 Solanum lycopersicum
Sopen10g008290 Solanum pennellii
Sp3g18490 Schrenkiella parvula
TAR626G0282 Trochodendron aralioides
TAR626G1959 Trochodendron aralioides
THA.LOC104817863 Tarenaya hassleriana
Thecc.07G033400 Theobroma cacao
Thhalv10022259m.g Eutrema salsugineum
TPR.G10855 Trifolium pratense
TPR.G1199 Trifolium pratense
TPR.G15002 Trifolium pratense
TPR.G29016 Trifolium pratense
TPR.G29630 Trifolium pratense
TPR.G3989 Trifolium pratense
TPR.G814 Trifolium pratense
TPR.G846 Trifolium pratense
TWI38G0959 Tripterygium wilfordii
unitig_578.g15992 Utricularia gibba
vmacro09701 Vaccinium macrocarpon
VMungo0647G1120 Vigna mungo
Zm00001eb352650 Zea mays
Zm00001eb352660 Zea mays
Zm00001eb352670 Zea mays

User provided reference genes

Program Settings