Gene: Os05g0498300

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os05g0498300
  • Transcript Identifier Os05t0498300-01
  • Gene Type Coding gene
  • Location chr05 : 24523178-24534092 : positive

Gene Family Information

  • ID HOM05D004988
  • #Genes/#Species 149/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os05t0498300-01
  • MSU-ID LOC_Os05g41880.1
  • symbol OsMSH5
  • name MutS-homolog 5
  • uniprot Q6L4V0

Descriptions

  • Description Rice homolog of MSH5, Meiosis-specific member of the MutS-homolog family, Control of class I crossover formation
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006298
IEA
GOA Databasemismatch repair
GO:0006298
IEA
InterPromismatch repair
GO:0007131
IMP
IBA
IEA
GOA Databasereciprocal meiotic recombination
GO:0010777
IEA
GOA Databasemeiotic mismatch repair involved in reciprocal meiotic recombination
GO:0051026
IMP
IEA
GOA Databasechiasma assembly
GO:0045143
IMP
IEA
GOA Databasehomologous chromosome segregation
GO:0000710
IBA
GOA Databasemeiotic mismatch repair
GO:0000712
IMP
GOA Databaseresolution of meiotic recombination intermediates
GO:0051321
IEA
GOA Databasemeiotic cell cycle

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030983
IEA
GOA Databasemismatched DNA binding
GO:0030983
IEA
InterPromismatched DNA binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0008094
IBA
GOA DatabaseATPase, acting on DNA
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0003677
IEA
GOA DatabaseDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000228
IBA
GOA Databasenuclear chromosome
GO:0043073
IEA
GOA Databasegerm cell nucleus
GO:0000794
IEA
GOA Databasecondensed nuclear chromosome
GO:0005694
IEA
GOA Databasechromosome
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR007696 DNA mismatch repair protein MutS, core
IPR000432 DNA mismatch repair protein MutS, C-terminal
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR017261 DNA mismatch repair protein MutS/MSH
IPR036187 DNA mismatch repair protein MutS, core domain superfamily
IPR045076 DNA mismatch repair MutS family
Mapman id Description
13.3.5.5.1.2.2 Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic crossover.class I interference-sensitive crossover pathway.MSH4-MSH5 Holliday junction stabilizing heterodimer.component MSH5