Gene: PGR083G0916

General Information

Structural Information

  • Species Punica granatum
  • Gene Identifier PGR083G0916
  • Transcript Identifier PGR083G0916.01
  • Gene Type Coding gene
  • Location NC_045133.1 : 26970955-26977388 : positive

Gene Family Information

  • ID HOM05D004988
  • #Genes/#Species 149/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pid XP_031404355.1
  • name LOC116213514
  • name XM_031548495.1
  • id gene-LOC116213514
  • uniprot A0A6P8EB03

Descriptions

  • product DNA mismatch repair protein MSH5-like
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006298
IEA
GOA Databasemismatch repair
GO:0006298
IEA
InterPromismatch repair
GO:0051026
ISO
PLAZA Integrative Orthologychiasma assembly AT3G20475
GO:0007131
ISO
PLAZA Integrative Orthologyreciprocal meiotic recombination AT3G20475
GO:0045143
ISO
PLAZA Integrative Orthologyhomologous chromosome segregation AT3G20475
GO:0000712
ISO
PLAZA Integrative Orthologyresolution of meiotic recombination intermediates Os05g0498300
GO:0010777
ISO
PLAZA Integrative Orthologymeiotic mismatch repair involved in reciprocal meiotic recombination AT3G20475

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0030983
IEA
GOA Databasemismatched DNA binding
GO:0030983
IEA
InterPromismatched DNA binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0000166
IEA
GOA Databasenucleotide binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043073
ISO
PLAZA Integrative Orthologygerm cell nucleus AT3G20475
GO:0000794
ISO
PLAZA Integrative Orthologycondensed nuclear chromosome AT3G20475

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR000432 DNA mismatch repair protein MutS, C-terminal
IPR036187 DNA mismatch repair protein MutS, core domain superfamily
IPR045076 DNA mismatch repair MutS family
Mapman id Description
13.3.5.5.1.2.2 Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic crossover.class I interference-sensitive crossover pathway.MSH4-MSH5 Holliday junction stabilizing heterodimer.component MSH5