Gene: Cc05_g13960

General Information

Structural Information

  • Species Coffea canephora
  • Gene Identifier Cc05_g13960
  • Transcript Identifier Cc05_g13960.1
  • Gene Type Coding gene
  • Location chr5 : 27354550-27365065 : negative

Gene Family Information

  • ID HOM05D004988
  • #Genes/#Species 149/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • UniProtKB O43196
  • UniProtKB D7T7Z8
  • UniProtKB Q6MG62
  • UniProtKB F4JEP5
  • UniProtKB Q9QUM7
  • UniProtKB A4URL6
  • id GSCOCG00020993001

Descriptions

  • Description Putative MutS protein homolog 5
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006298
IEA
InterPromismatch repair
GO:0051026
ISO
PLAZA Integrative Orthologychiasma assembly AT3G20475
GO:0007131
ISO
PLAZA Integrative Orthologyreciprocal meiotic recombination AT3G20475
GO:0045143
ISO
PLAZA Integrative Orthologyhomologous chromosome segregation AT3G20475
GO:0000712
ISO
PLAZA Integrative Orthologyresolution of meiotic recombination intermediates Os05g0498300
GO:0010777
ISO
PLAZA Integrative Orthologymeiotic mismatch repair involved in reciprocal meiotic recombination AT3G20475

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
InterProATP binding
GO:0030983
IEA
InterPromismatched DNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043073
ISO
PLAZA Integrative Orthologygerm cell nucleus AT3G20475
GO:0000794
ISO
PLAZA Integrative Orthologycondensed nuclear chromosome AT3G20475

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000432 DNA mismatch repair protein MutS, C-terminal
IPR011184 DNA mismatch repair Msh2-type
IPR007696 DNA mismatch repair protein MutS, core
IPR045076 DNA mismatch repair MutS family
IPR007861 DNA mismatch repair protein MutS, clamp
IPR036187 DNA mismatch repair protein MutS, core domain superfamily
IPR027417 P-loop containing nucleoside triphosphate hydrolase
Mapman id Description
13.3.5.5.1.2.2 Cell cycle organisation.mitosis and meiosis.meiotic recombination.meiotic crossover.class I interference-sensitive crossover pathway.MSH4-MSH5 Holliday junction stabilizing heterodimer.component MSH5