Gene: TPR.G29016

General Information

Structural Information

  • Species Trifolium pratense
  • Gene Identifier TPR.G29016
  • Transcript Identifier TPR.T30000
  • Gene Type Coding gene
  • Location Tp57577_TGAC_v2_scaf_16961 : 91-1272 : positive

Gene Family Information

  • ID HOM05D004988
  • #Genes/#Species 149/95
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Tp57577_TGAC_v2_mRNA30000.v2
  • id Tp57577_TGAC_v2_gene29016.v2
  • pacid 35959165

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006298
IEA
InterPromismatch repair
GO:0051026
ISO
PLAZA Integrative Orthologychiasma assembly AT3G20475
GO:0007131
ISO
PLAZA Integrative Orthologyreciprocal meiotic recombination AT3G20475
GO:0045143
ISO
PLAZA Integrative Orthologyhomologous chromosome segregation AT3G20475
GO:0000712
ISO
PLAZA Integrative Orthologyresolution of meiotic recombination intermediates Os05g0498300
GO:0010777
ISO
PLAZA Integrative Orthologymeiotic mismatch repair involved in reciprocal meiotic recombination AT3G20475

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
InterProATP binding
GO:0030983
IEA
InterPromismatched DNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0043073
ISO
PLAZA Integrative Orthologygerm cell nucleus AT3G20475
GO:0000794
ISO
PLAZA Integrative Orthologycondensed nuclear chromosome AT3G20475

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036187 DNA mismatch repair protein MutS, core domain superfamily
IPR045076 DNA mismatch repair MutS family
IPR007861 DNA mismatch repair protein MutS, clamp
Mapman id Description
35.1 not assigned.annotated