Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A07p39580 Brassica napus
Aa31LG7G3010 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_369.510 Anthoceros agrestis
Actinidia01552 Actinidia chinensis
Actinidia15959 Actinidia chinensis
Actinidia15960 Actinidia chinensis
Actinidia15961 Actinidia chinensis
Actinidia23032 Actinidia chinensis
AL2G33520 Arabidopsis lyrata
AL6G46370 Arabidopsis lyrata
Aqoxy7G00451 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.6AWP8P Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.907RVD Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.UIX0GM Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.VU3SB5 Arachis hypogaea
AT1G73720 Arabidopsis thaliana
ATR0757G167 Amborella trichopoda
Atru.chr13.2273 Acer truncatum
AUR62000532 Chenopodium quinoa
AUR62006879 Chenopodium quinoa
BcaB03g15078 Brassica carinata
BcaB03g15725 Brassica carinata
BcaC08g46793 Brassica carinata
BolC2t07949H Brassica oleracea
BolC3t17856H Brassica oleracea
BolC4t22950H Brassica oleracea
BolC5t34511H Brassica oleracea
BolC6t38501H Brassica oleracea
BolC6t39822H Brassica oleracea
BraA07t31507Z Brassica rapa
C05p58610 Brassica napus
C06p33880 Brassica napus
C06p47870 Brassica napus
CANSAT21G1785 Cannabis sativa
CANSAT25G2510 Cannabis sativa
CARHR066790 Cardamine hirsuta
Carub.0002s2047 Capsella rubella
Ca_03946_v3 Cicer arietinum L.
Ca_21945_v3 Cicer arietinum L.
CBR_g5735 Chara braunii
Cc10_g16460 Coffea canephora
CDE03G0432 Ceratophyllum demersum
CDE04G2825 Ceratophyllum demersum
Cfa008117 Carpinus fangiana
Ciclev10010841m.g Citrus clementina
CiPaw.03G017600 Carya illinoinensis
ClCG11G008790 Citrullus lanatus
COL.COLO4_24626 Corchorus olitorius
COL.COLO4_26800 Corchorus olitorius
Cpa.g.c40110 Carica papaya
Cpa.g.sc20.22 Carica papaya
Cre01.g020400 Chlamydomonas reinhardtii
CsaV3_2G033060 Cucumis sativus L.
CSS0028462 Camellia sinensis var. sinensis
DCAR_005757 Daucus carota
Dinv07060 Davidia involucrata
Dinv33198 Davidia involucrata
Duzib177G0537 Durio zibethinus
Duzib211G0352 Durio zibethinus
ECA232G0634 Erigeron canadensis
EL10Ac4g09638 Beta vulgaris
EL10Ac4g09640 Beta vulgaris
EL10Ac4g09644 Beta vulgaris
Eucgr.E01768 Eucalyptus grandis
FAN04G0777 Fragaria x ananassa
FAN08G0446 Fragaria x ananassa
FAN18G3613 Fragaria x ananassa
FvH4_5g32860 Fragaria vesca
Glyma.04G106300 Glycine max
Glyma.04G149500 Glycine max
Glyma.05G170500 Glycine max
Glyma.08G128700 Glycine max
Gohir.A13G118200 Gossypium hirsutum
Gohir.D13G122000 Gossypium hirsutum
Gorai.013G136700 Gossypium raimondii
GSVIVG01007685001 Vitis vinifera
HanXRQChr04g0123031 Helianthus annuus
HanXRQChr07g0191341 Helianthus annuus
HanXRQChr15g0492161 Helianthus annuus
Haze_13915 Corylus avellana
Haze_27333 Corylus avellana
Hma1.2p1_0150F.1_g066770 Hydrangea macrophylla
Hma1.2p1_1698F.1_g298123 Hydrangea macrophylla
HPP92_002632 Vanilla planifolia
Hund07225 Selenicereus undatus
Lalb_Chr11g0075451 Lupinus albus
Lj6g0012354 Lotus japonicus
Lj9C233G3 Lonicera japonica
Lj9C410G7 Lonicera japonica
Lsat_1_v5_gn_0_10701 Lactuca sativa
Lsat_1_v5_gn_3_52840 Lactuca sativa
Manes.01G021200 Manihot esculenta
Mapoly0044s0021 Marchantia polymorpha
MBI04_g37683_MAGBIO Magnolia biondii
MD08G1215900 Malus domestica
MD15G1400300 Malus domestica
Medtr3g052220 Medicago truncatula
Migut.C01340 Erythranthe guttata
MSTRG.1576 Avicennia marina
MSTRG.25488 Avicennia marina
Nitab4.5_0000748g0110 Nicotiana tabacum
Nitab4.5_0001799g0050 Nicotiana tabacum
Nitab4.5_0006477g0030 Nicotiana tabacum
Nitab4.5_0006564g0010 Nicotiana tabacum
Nn1g01353 Nelumbo nucifera
Oeu002300.1 Olea europaea
Os01g0322800 Oryza sativa ssp. japonica
Peaxi162Scf00688g00227 Petunia axillaris
PGR031G3502 Punica granatum
PGSC0003DMG400005186 Solanum tuberosum
Phvul.002G251300 Phaseolus vulgaris
Potri.011G156900 Populus trichocarpa
Pp3c11_23660 Physcomitrium patens
Pp3c7_2610 Physcomitrium patens
PRCOL_00002301 Prasinoderma coloniale
Prupe.1G547900 Prunus persica
Psat5g178560 Pisum sativum
PSO384G0554 Papaver somniferum
PSO478G2485 Papaver somniferum
PSO782G1233 Papaver somniferum
QL09p004408 Quercus lobata
RcHm_v2.0_Chr6g0269341 Rosa chinensis
RcHm_v2.0_Chr7g0230731 Rosa chinensis
Rhsim12G0003800 Rhododendron simsii
Sabra11G0143100 Salix brachista
Sabra16G0312200 Salix brachista
SalBow8G3404 Salvia bowleyana
Sc20g0002260 Simmondsia chinensis
Sed0014706 Sechium edule
Sed0018019 Sechium edule
SEGI_07677 Sequoiadendron giganteum
SEGI_19922 Sequoiadendron giganteum
SGA_v2.0_scaffold118G32576 Striga asiatica
SGA_v2.0_scaffold24G10617 Striga asiatica
SHI07326 Sapria himalayana
SMO119G0417 Selaginella moellendorffii
Solyc06g064830.3 Solanum lycopersicum
Sopen06g023340 Solanum pennellii
Sp5g28910 Schrenkiella parvula
TAR374G0778 Trochodendron aralioides
TAR375G0910 Trochodendron aralioides
THA.LOC104813908 Tarenaya hassleriana
Thecc.08G195800 Theobroma cacao
Thhalv10018372m.g Eutrema salsugineum
TPR.G15252 Trifolium pratense
TPR.G33753 Trifolium pratense
TPR.G33759 Trifolium pratense
TWI14G0987 Tripterygium wilfordii
unitig_748.g7731 Utricularia gibba
vmacro00929 Vaccinium macrocarpon
VMungo0251G2201 Vigna mungo
Zm00001eb130810 Zea mays

User provided reference genes

Program Settings