Gene: Thecc.08G195800

General Information

Structural Information

  • Species Theobroma cacao
  • Gene Identifier Thecc.08G195800
  • Transcript Identifier Thecc.08G195800.1
  • Gene Type Coding gene
  • Location Chromosome_8 : 20078794-20100636 : positive

Gene Family Information

  • ID HOM05D004842
  • #Genes/#Species 152/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Thecc.08G195800.v2.1
  • pacid 42004676
  • ancestorIdentifier Thecc1EG036573.CGDv1.1
  • ancestorIdentifier Thecc1EG036573t1.CGDv1.1

Descriptions

  • Description Transducin family protein / WD-40 repeat family protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008380
ISO
PLAZA Integrative OrthologyRNA splicing AT1G73720

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G73720
GO:0016607
ISO
PLAZA Integrative Orthologynuclear speck AT1G73720

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001680 WD40 repeat
IPR006595 CTLH, C-terminal LisH motif
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR006594 LIS1 homology motif
IPR036322 WD40-repeat-containing domain superfamily
IPR020472 G-protein beta WD-40 repeat
Mapman id Description
16.2.6.10.1 RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP factor activities.SMU splicing factor complex.component SMU1