Gene: Pp3c7_2610

General Information

Structural Information

  • Species Physcomitrium patens
  • Gene Identifier Pp3c7_2610
  • Transcript Identifier Pp3c7_2610V3.3
  • Gene Type Coding gene
  • Location Chr07 : 1630151-1635564 : negative

Gene Family Information

  • ID HOM05D004842
  • #Genes/#Species 152/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • name Pp3c7_2610V3.3
  • pacid 32922871
  • alias Phypa_189716
  • alias Phpat.007G011700
  • alias Pp1s136_176V6
  • uniprot A9SYA1

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008380
IBA
GOA DatabaseRNA splicing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0071011
IBA
GOA Databaseprecatalytic spliceosome
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G73720
GO:0016607
ISO
PLAZA Integrative Orthologynuclear speck AT1G73720

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR006595 CTLH, C-terminal LisH motif
IPR001680 WD40 repeat
IPR006594 LIS1 homology motif
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR020472 G-protein beta WD-40 repeat
IPR036322 WD40-repeat-containing domain superfamily
Mapman id Description
16.2.6.10.1 RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP factor activities.SMU splicing factor complex.component SMU1