Gene: Cc10_g16460

General Information

Structural Information

  • Species Coffea canephora
  • Gene Identifier Cc10_g16460
  • Transcript Identifier Cc10_g16460.1
  • Gene Type Coding gene
  • Location chr10 : 27464165-27478397 : negative

Gene Family Information

  • ID HOM05D004842
  • #Genes/#Species 152/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • UniProtKB Q5ZME8
  • UniProtKB Q94IP9
  • UniProtKB Q2TAY7
  • UniProtKB I1KSS9
  • UniProtKB D7SHM1
  • UniProtKB Q3UKJ7
  • id GSCOCG00013408001

Descriptions

  • Description WD40 repeat-containing protein SMU1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008380
ISO
PLAZA Integrative OrthologyRNA splicing AT1G73720

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G73720
GO:0016607
ISO
PLAZA Integrative Orthologynuclear speck AT1G73720

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036322 WD40-repeat-containing domain superfamily
IPR001680 WD40 repeat
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR006595 CTLH, C-terminal LisH motif
IPR020472 G-protein beta WD-40 repeat
IPR006594 LIS1 homology motif
Mapman id Description
16.2.6.10.1 RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP factor activities.SMU splicing factor complex.component SMU1