Gene: COL.COLO4_26800

General Information

Structural Information

  • Species Corchorus olitorius
  • Gene Identifier COL.COLO4_26800
  • Transcript Identifier COL.rna25527
  • Gene Type Coding gene
  • Location AWUE01019383.1 : 96824-103994 : negative

Gene Family Information

  • ID HOM05D004842
  • #Genes/#Species 152/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid rna25527
  • GenBank OMO73916.1
  • id gene26772
  • gene_name COLO4_26800
  • uniprot A0A1R3HU55

Descriptions

  • Description hypothetical protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008380
ISO
PLAZA Integrative OrthologyRNA splicing AT1G73720

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G73720
GO:0016607
ISO
PLAZA Integrative Orthologynuclear speck AT1G73720

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR001680 WD40 repeat
IPR006595 CTLH, C-terminal LisH motif
IPR006594 LIS1 homology motif
IPR020472 G-protein beta WD-40 repeat
IPR036322 WD40-repeat-containing domain superfamily
Mapman id Description
16.2.6.10.1 RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP factor activities.SMU splicing factor complex.component SMU1