Gene: SGA_v2.0_scaffold118G32576

General Information

Structural Information

  • Species Striga asiatica
  • Gene Identifier SGA_v2.0_scaffold118G32576
  • Transcript Identifier SGA_v2.0_scaffold118T32576
  • Gene Type Coding gene
  • Location scaffold118 : 705646-714643 : positive

Gene Family Information

  • ID HOM05D004842
  • #Genes/#Species 152/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • product WD40 repeat-containing protein SMU1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045944
IEA
InterPropositive regulation of transcription by RNA polymerase II
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0008380
ISO
PLAZA Integrative OrthologyRNA splicing AT1G73720

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000977
IEA
InterProRNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0003677
IEA
InterProDNA binding
GO:0046983
IEA
InterProprotein dimerization activity
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus
GO:0016607
ISO
PLAZA Integrative Orthologynuclear speck AT1G73720

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR033896 MADS MEF2-like
IPR036879 Transcription factor, MADS-box superfamily
IPR006595 CTLH, C-terminal LisH motif
IPR002487 Transcription factor, K-box
IPR002100 Transcription factor, MADS-box
IPR006594 LIS1 homology motif
IPR001680 WD40 repeat
IPR020472 G-protein beta WD-40 repeat
IPR036322 WD40-repeat-containing domain superfamily
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
Mapman id Description
15.5.14 RNA biosynthesis.transcriptional regulation.transcription factor (MADS/AGL)
16.2.6.10.1 RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP factor activities.SMU splicing factor complex.component SMU1