Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A09p65740 Brassica napus
Aa31sc17G210 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_344.4182 Anthoceros agrestis
AagrBONN_evm.TU.Sc2ySwM_362.2737 Anthoceros agrestis
Actinidia21607 Actinidia chinensis
Actinidia33293 Actinidia chinensis
Ah.15g091500 Amaranthus hybridus
AL1G19270 Arabidopsis lyrata
Aqoxy5G01066 Aquilegia oxysepala
Aqoxy7G00645 Aquilegia oxysepala
Aqoxy7G00646 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.61K3Y7 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.GG1KFP Arachis hypogaea
AT1G08840 Arabidopsis thaliana
ATR0705G006 Amborella trichopoda
ATR0705G062 Amborella trichopoda
Atru.chr5.137 Acer truncatum
Atru.chr5.23 Acer truncatum
Atru.chr5.51 Acer truncatum
AUR62013806 Chenopodium quinoa
AUR62023352 Chenopodium quinoa
BcaC07g41923 Brassica carinata
BcaC09g51789 Brassica carinata
BolC1t00891H Brassica oleracea
BolC8t52508H Brassica oleracea
BraA09t41917Z Brassica rapa
C01p09000 Brassica napus
C08p49810 Brassica napus
CAN.G1480.3 Capsicum annuum
CANSAT21G1834 Cannabis sativa
CARHR008760 Cardamine hirsuta
CARHR086610 Cardamine hirsuta
Carub.0001s0819 Capsella rubella
Ca_04616_v3 Cicer arietinum L.
CBR_g41486 Chara braunii
Cc00_g16960 Coffea canephora
Cc07_g20080 Coffea canephora
Cc07_g20090 Coffea canephora
CDE11G0321 Ceratophyllum demersum
CDE11G0342 Ceratophyllum demersum
CDE11G0754 Ceratophyllum demersum
Cfa011006 Carpinus fangiana
Cfa026676 Carpinus fangiana
Ciclev10018521m.g Citrus clementina
CiPaw.14G012800 Carya illinoinensis
ClCG05G002760 Citrullus lanatus
COL.COLO4_19317 Corchorus olitorius
Cpa.g.sc10.21 Carica papaya
Cpa.g.sc10.23 Carica papaya
Cre12.g528200 Chlamydomonas reinhardtii
CsaV3_3G010270 Cucumis sativus L.
CSS0005414 Camellia sinensis var. sinensis
DCAR_029534 Daucus carota
Dinv31197 Davidia involucrata
Duzib106G1753 Durio zibethinus
ECA234G1924 Erigeron canadensis
EL10Ac8g19253 Beta vulgaris
Eucgr.D01139 Eucalyptus grandis
FAN03G0722 Fragaria x ananassa
FAN06G0930 Fragaria x ananassa
FAN10G0616 Fragaria x ananassa
FAN10G1986 Fragaria x ananassa
FvH4_7g08480 Fragaria vesca
Glyma.04G128350 Glycine max
Glyma.06G310500 Glycine max
Gohir.A05G333800 Gossypium hirsutum
Gohir.D04G072675 Gossypium hirsutum
Gorai.012G081700 Gossypium raimondii
GSVIVG01018404001 Vitis vinifera
GSVIVG01018406001 Vitis vinifera
HanXRQChr08g0226321 Helianthus annuus
Haze_02925 Corylus avellana
Hma1.2p1_0601F.1_g187160 Hydrangea macrophylla
Hma1.2p1_0601F.1_g187170 Hydrangea macrophylla
Hma1.2p1_0601F.1_g187180 Hydrangea macrophylla
HPP92_003322 Vanilla planifolia
HPP92_003323 Vanilla planifolia
HPP92_003324 Vanilla planifolia
Hund17140 Selenicereus undatus
Lalb_Chr03g0040701 Lupinus albus
Lalb_Chr03g0040711 Lupinus albus
Lj1g0025017 Lotus japonicus
Lj7C553G7 Lonicera japonica
Lj7P553T26 Lonicera japonica
Lsat_1_v5_gn_4_44681 Lactuca sativa
Manes.05G060200 Manihot esculenta
Mapoly0039s0120 Marchantia polymorpha
MBI05_g27233_MAGBIO Magnolia biondii
MBI08_g06419_MAGBIO Magnolia biondii
MBI08_g07078_MAGBIO Magnolia biondii
MBI15_g07200_MAGBIO Magnolia biondii
MBI17_g09706_MAGBIO Magnolia biondii
MD02G1227500 Malus domestica
MD07G1085900 Malus domestica
Medtr7g034575 Medicago truncatula
Medtr8g467950 Medicago truncatula
MELO3C006248.2 Cucumis melo
Migut.B01471 Erythranthe guttata
Nitab4.5_0006227g0020 Nicotiana tabacum
Nitab4.5_0007244g0010 Nicotiana tabacum
Nitab4.5_0013532g0020 Nicotiana tabacum
Nn1g00608 Nelumbo nucifera
Nn2g14687 Nelumbo nucifera
Oeu034864.1 Olea europaea
Os04g0588200 Oryza sativa ssp. japonica
Peaxi162Scf00417g00039 Petunia axillaris
Peaxi162Scf01124g00124 Petunia axillaris
PGR083G0266 Punica granatum
Phvul.005G016100 Phaseolus vulgaris
Potri.014G180200 Populus trichocarpa
PRCOL_00002243 Prasinoderma coloniale
Prupe.2G112200 Prunus persica
Psat0s5282g0120 Pisum sativum
Psat2g050360 Pisum sativum
Psat2g050440 Pisum sativum
Psat3g163800 Pisum sativum
Psat5g098920 Pisum sativum
PSO063G2621 Papaver somniferum
PSO782G4318 Papaver somniferum
QL04p025376 Quercus lobata
RcHm_v2.0_Chr1g0343241 Rosa chinensis
RcHm_v2.0_Chr2g0122951 Rosa chinensis
RcHm_v2.0_Chr2g0122961 Rosa chinensis
RcHm_v2.0_Chr2g0122971 Rosa chinensis
Rhsim01G0145100 Rhododendron simsii
Sabra14G0140300 Salix brachista
Sabra14G0140400 Salix brachista
Sc08g0006560 Simmondsia chinensis
Sed0025177 Sechium edule
SEGI_04112 Sequoiadendron giganteum
SEGI_04973 Sequoiadendron giganteum
SEGI_26005 Sequoiadendron giganteum
SGA_v2.0_scaffold578G53026 Striga asiatica
SHI13670 Sapria himalayana
SHI13671 Sapria himalayana
SHI13672 Sapria himalayana
SHI13673 Sapria himalayana
Solyc01g088380.3 Solanum lycopersicum
Sopen01g035210 Solanum pennellii
Sp1g07480 Schrenkiella parvula
TAR375G0889 Trochodendron aralioides
THA.LOC104808236 Tarenaya hassleriana
Thecc.07G000100 Theobroma cacao
Thecc.10G001100 Theobroma cacao
Thhalv10006571m.g Eutrema salsugineum
Thhalv10015727m.g Eutrema salsugineum
TPR.G14862 Trifolium pratense
TPR.G17006 Trifolium pratense
TWI23G0233 Tripterygium wilfordii
unitig_8.g3844 Utricularia gibba
vmacro21094 Vaccinium macrocarpon
VMungo1080G1086 Vigna mungo
Zm00001eb072560 Zea mays

User provided reference genes

Program Settings