Gene: C08p49810
General Information
Structural Information
- Species Brassica napus
- Gene Identifier C08p49810
- Transcript Identifier C08p49810
- Gene Type Coding gene
- Location C08 : 39519642-39527865 : positive
Gene Family Information
- ID HOM05D004823
- #Genes/#Species 153/94
- Phylogenetic origin
- ID ORTHO05D005814
- #Genes/#Species 151/94
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid C08p49810.1_BnaDAR
- v5 BnaC08g42960D
- single_cell_id C08p49810.1-BnaDAR
- ensembl GSBRNA2T00019332001
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0033567 | IEA | InterPro | DNA replication, Okazaki fragment processing | |
| GO:0006281 | ISO | PLAZA Integrative Orthology | DNA repair | AT1G08840 |
| GO:0006260 | ISO | PLAZA Integrative Orthology | DNA replication | AT1G08840 |
| GO:0010073 | ISO | PLAZA Integrative Orthology | meristem maintenance | AT1G08840 |
| GO:0006974 | ISO | PLAZA Integrative Orthology | cellular response to DNA damage stimulus | AT1G08840 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0017108 | IEA | InterPro | 5'-flap endonuclease activity | |
| GO:0017116 | IEA | InterPro | single-stranded DNA helicase activity | |
| GO:0004386 | IEA | InterPro | helicase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT1G08840 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR026851 | DNA replication ATP-dependent helicase/nuclease Dna2 |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR041677 | DNA2/NAM7 helicase, helicase domain |
| IPR022765 | Dna2/Cas4, domain of unknown function DUF83 |
| IPR045055 | DNA2/NAM7-like helicase |
| IPR041679 | DNA2/NAM7 helicase-like, C-terminal |
| IPR014808 | DNA replication factor Dna2, N-terminal |
| IPR011604 | Exonuclease, phage-type/RecB, C-terminal |
| Mapman id | Description |
|---|---|
| 13.2.4.4 | Cell cycle organisation.DNA replication.maturation.auxiliary factor (JHS1/DNA2) |