Gene: Solyc01g088380.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc01g088380.3
  • Transcript Identifier Solyc01g088380.3.1
  • Gene Type Coding gene
  • Location SL4.0ch01 : 75383651-75402317 : negative

Gene Family Information

  • ID HOM05D004823
  • #Genes/#Species 153/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc01g088380.3.1
  • uniprot A0A3Q7EJL1
  • gene_id Solyc01g088380

Descriptions

  • Description DNA replication helicase (AHRD V3.3 *** A0A2U1N8T9_ARTAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006281
ISO
PLAZA Integrative OrthologyDNA repair AT1G08840
GO:0006260
ISO
PLAZA Integrative OrthologyDNA replication AT1G08840
GO:0010073
ISO
PLAZA Integrative Orthologymeristem maintenance AT1G08840
GO:0006974
ISO
PLAZA Integrative Orthologycellular response to DNA damage stimulus AT1G08840

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004386
IEA
GOA Databasehelicase activity
GO:0004386
IEA
InterProhelicase activity
GO:0003723
IBA
GOA DatabaseRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G08840

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014808 DNA replication factor Dna2, N-terminal
IPR041677 DNA2/NAM7 helicase, helicase domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR011604 Exonuclease, phage-type/RecB, C-terminal
IPR045055 DNA2/NAM7-like helicase
IPR041679 DNA2/NAM7 helicase-like, C-terminal
Mapman id Description
13.2.4.4 Cell cycle organisation.DNA replication.maturation.auxiliary factor (JHS1/DNA2)