Gene: HPP92_003322

General Information

Structural Information

  • Species Vanilla planifolia
  • Gene Identifier HPP92_003322
  • Transcript Identifier Vpl01Ag03322.1
  • Gene Type Coding gene
  • Location CM028150.1 : 57079055-57141854 : positive

Gene Family Information

  • ID HOM05D004823
  • #Genes/#Species 153/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Vpl01Ag03322.1
  • pid KAG0498631.1

Descriptions

  • Description DNA replication ATP-dependent helicase Dna2 ***
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0033567
IEA
InterProDNA replication, Okazaki fragment processing
GO:0006281
ISO
PLAZA Integrative OrthologyDNA repair AT1G08840
GO:0006260
ISO
PLAZA Integrative OrthologyDNA replication AT1G08840
GO:0010073
ISO
PLAZA Integrative Orthologymeristem maintenance AT1G08840
GO:0006974
ISO
PLAZA Integrative Orthologycellular response to DNA damage stimulus AT1G08840

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0017108
IEA
InterPro5'-flap endonuclease activity
GO:0017116
IEA
InterProsingle-stranded DNA helicase activity
GO:0004386
ISO
PLAZA Homology (enrichment)helicase activity HOM05D004823

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G08840

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011604 Exonuclease, phage-type/RecB, C-terminal
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR014808 DNA replication factor Dna2, N-terminal
IPR045055 DNA2/NAM7-like helicase
IPR026851 DNA replication ATP-dependent helicase/nuclease Dna2
Mapman id Description
35.1 not assigned.annotated