Gene: Zm00001eb072560

General Information

Structural Information

  • Species Zea mays
  • Gene Identifier Zm00001eb072560
  • Transcript Identifier Zm00001eb072560_T001
  • Gene Type Coding gene
  • Location 2 : 14539628-14554210 : negative

Gene Family Information

  • ID HOM05D004823
  • #Genes/#Species 153/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Zm00001eb072560_T001
  • pid Zm00001eb072560_P001
  • uniprot A0A1D6EWB8
  • uniprot A0A1D6E1N0
  • uniprot A0A3L6G2D4
  • uniprot A0A1D6EWC4
  • uniprot A0A1D6E1N9
  • uniprot A0A1D6E1M9
  • uniprot A0A1D6E1M2
  • uniprot A0A1D6E1N3
  • uniprot A0A1D6E1M3
  • uniprot A0A1D6E1M0
  • uniprot A0A1D6E1N1
  • uniprot A0A1D6E1M1
  • uniprot A0A1D6E1M6
  • uniprot A0A1D6E1M7
  • uniprot A0A1D6E1M4
  • uniprot A0A1D6E1M5
  • V4_identifier Zm00001d002510

Descriptions

  • Description Zm00001e007116
  • Description Regulator of nonsense transcripts 1 homolog
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006260
IEA
GOA DatabaseDNA replication
GO:0006281
IEA
GOA DatabaseDNA repair
GO:0006974
IEA
GOA Databasecellular response to DNA damage stimulus
GO:0008152
IEA
GOA Databasemetabolic process
GO:0010073
IEA
GOA Databasemeristem maintenance
GO:0033567
IEA
GOA DatabaseDNA replication, Okazaki fragment processing
GO:0033567
IEA
InterProDNA replication, Okazaki fragment processing
GO:0090305
IEA
GOA Databasenucleic acid phosphodiester bond hydrolysis
GO:0000184
IEA
GOA Databasenuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0032508
IEA
GOA DatabaseDNA duplex unwinding

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004518
IEA
GOA Databasenuclease activity
GO:0003678
IEA
GOA DatabaseDNA helicase activity
GO:0051536
IEA
GOA Databaseiron-sulfur cluster binding
GO:0003824
IEA
GOA Databasecatalytic activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0017108
IEA
GOA Database5'-flap endonuclease activity
GO:0017108
IEA
InterPro5'-flap endonuclease activity
GO:0017116
IEA
GOA Databasesingle-stranded DNA helicase activity
GO:0017116
IEA
InterProsingle-stranded DNA helicase activity
GO:0004386
IEA
GOA Databasehelicase activity
GO:0004386
IEA
InterProhelicase activity
GO:0003724
IEA
GOA DatabaseRNA helicase activity
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0051539
IEA
GOA Database4 iron, 4 sulfur cluster binding
GO:0046872
IEA
GOA Databasemetal ion binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005694
IEA
GOA Databasechromosome
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0005737
IEA
GOA Databasecytoplasm
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011604 Exonuclease, phage-type/RecB, C-terminal
IPR045055 DNA2/NAM7-like helicase
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR026851 DNA replication ATP-dependent helicase/nuclease Dna2
IPR041677 DNA2/NAM7 helicase, helicase domain
IPR014808 DNA replication factor Dna2, N-terminal
Mapman id Description
13.2.4.4 Cell cycle organisation.DNA replication.maturation.auxiliary factor (JHS1/DNA2)