Gene: Carub.0001s0819

General Information

Structural Information

  • Species Capsella rubella
  • Gene Identifier Carub.0001s0819
  • Transcript Identifier Carub.0001s0819.4
  • Gene Type Coding gene
  • Location scaffold_1 : 2911866-2920370 : negative

Gene Family Information

  • ID HOM05D004823
  • #Genes/#Species 153/94
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Carub.0001s0819.v1.1
  • pacid 39227361
  • synonym Carubv10011024m.g

Descriptions

  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0033567
IEA
InterProDNA replication, Okazaki fragment processing
GO:0006281
ISO
PLAZA Integrative OrthologyDNA repair AT1G08840
GO:0006260
ISO
PLAZA Integrative OrthologyDNA replication AT1G08840
GO:0010073
ISO
PLAZA Integrative Orthologymeristem maintenance AT1G08840
GO:0006974
ISO
PLAZA Integrative Orthologycellular response to DNA damage stimulus AT1G08840

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004386
IEA
InterProhelicase activity
GO:0017108
IEA
InterPro5'-flap endonuclease activity
GO:0017116
IEA
InterProsingle-stranded DNA helicase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G08840

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014808 DNA replication factor Dna2, N-terminal
IPR041677 DNA2/NAM7 helicase, helicase domain
IPR022765 Dna2/Cas4, domain of unknown function DUF83
IPR011604 Exonuclease, phage-type/RecB, C-terminal
IPR041679 DNA2/NAM7 helicase-like, C-terminal
IPR026851 DNA replication ATP-dependent helicase/nuclease Dna2
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR045055 DNA2/NAM7-like helicase
Mapman id Description
13.2.4.4 Cell cycle organisation.DNA replication.maturation.auxiliary factor (JHS1/DNA2)