Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A01p12130 Brassica napus
A03p52450 Brassica napus
A08p14890 Brassica napus
Aa31LG6G2820 Aethionema arabicum
Aa31LG9G8700 Aethionema arabicum
Actinidia35547 Actinidia chinensis
Ah.10g036820 Amaranthus hybridus
Ah.16g102810 Amaranthus hybridus
AL7G33430 Arabidopsis lyrata
AL8G15320 Arabidopsis lyrata
AL8G15330 Arabidopsis lyrata
Aqoxy1G00534 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.1VG4JJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.B8WTIA Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.IZ2YN8 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.TBHV4Q Arachis hypogaea
AT4G20440 Arabidopsis thaliana
AT5G44500 Arabidopsis thaliana
ATR0697G198 Amborella trichopoda
Atru.chr10.664 Acer truncatum
AUR62000301 Chenopodium quinoa
AUR62009174 Chenopodium quinoa
AUR62009175 Chenopodium quinoa
AUR62022051 Chenopodium quinoa
BcaB03g11674 Brassica carinata
BcaC01g00671 Brassica carinata
BcaC09g51319 Brassica carinata
BcaNung04159 Brassica carinata
BcaNung05058 Brassica carinata
BcaNung05387 Brassica carinata
BcaNung05680 Brassica carinata
BolC1t01401H Brassica oleracea
BolC3t20578H Brassica oleracea
BraA01t01156Z Brassica rapa
BraA03t14323Z Brassica rapa
C01p14450 Brassica napus
C03p82950 Brassica napus
CAN.G78.61 Capsicum annuum
CANSAT25G2913 Cannabis sativa
CARHR227270 Cardamine hirsuta
Carub.0007s2072 Capsella rubella
Carub.0008s0400 Capsella rubella
Ca_06302_v3 Cicer arietinum L.
CBR_g48393 Chara braunii
Cc09_g05790 Coffea canephora
CDE10G0749 Ceratophyllum demersum
CDE10G0801 Ceratophyllum demersum
Cfa008716 Carpinus fangiana
Ciclev10018122m.g Citrus clementina
CiPaw.13G141500 Carya illinoinensis
ClCG01G025430 Citrullus lanatus
COL.COLO4_26893 Corchorus olitorius
Cpa.g.sc285.3 Carica papaya
Cre14.g611150 Chlamydomonas reinhardtii
CsaV3_6G052680 Cucumis sativus L.
CSS0022278 Camellia sinensis var. sinensis
CSS0027232 Camellia sinensis var. sinensis
CSS0048817 Camellia sinensis var. sinensis
DCAR_006631 Daucus carota
Dinv04119 Davidia involucrata
Dinv23904 Davidia involucrata
Duzib160G0857 Durio zibethinus
ECA238G0265 Erigeron canadensis
EL10Ac1g00433 Beta vulgaris
Eucgr.L00005 Eucalyptus grandis
FAN04G0169 Fragaria x ananassa
FAN08G0371 Fragaria x ananassa
FAN13G1169 Fragaria x ananassa
FAN13G1413 Fragaria x ananassa
FAN18G1507 Fragaria x ananassa
FvH4_5g05920 Fragaria vesca
Glyma.02G288900 Glycine max
Glyma.14G025900 Glycine max
Gohir.A10G005600 Gossypium hirsutum
Gohir.D10G005600 Gossypium hirsutum
Gorai.011G006200 Gossypium raimondii
GSVIVG01034611001 Vitis vinifera
HanXRQChr08g0218671 Helianthus annuus
HanXRQChr10g0304281 Helianthus annuus
Haze_11726 Corylus avellana
Hma1.2p1_0258F.1_g104020 Hydrangea macrophylla
Hma1.2p1_0892F.1_g233360 Hydrangea macrophylla
HPP92_018640 Vanilla planifolia
Lalb_Chr04g0248641 Lupinus albus
Lalb_Chr10g0106891 Lupinus albus
Lj5C81T13 Lonicera japonica
Lj9P663T35 Lonicera japonica
LjContig00310g0017486 Lotus japonicus
Lsat_1_v5_gn_2_112821 Lactuca sativa
Lsat_1_v5_gn_8_16800 Lactuca sativa
Lsat_1_v5_gn_8_20501 Lactuca sativa
Manes.06G060100 Manihot esculenta
Manes.14G127000 Manihot esculenta
Mapoly0023s0062 Marchantia polymorpha
MBI05_g12101_MAGBIO Magnolia biondii
MCO12G128 Micromonas commoda
MD04G1002600 Malus domestica
MD04G1223300 Malus domestica
MD06G1169400 Malus domestica
MD14G1174700 Malus domestica
Medtr5g092010 Medicago truncatula
Medtr8g080090 Medicago truncatula
MELO3C007041.2 Cucumis melo
Migut.A00202 Erythranthe guttata
Migut.E01529 Erythranthe guttata
MSTRG.1661 Avicennia marina
Nn1g09322 Nelumbo nucifera
Oeu011279.1 Olea europaea
Oeu031694.1 Olea europaea
Oeu043883.1 Olea europaea
Peaxi162Scf00020g00025 Petunia axillaris
PGR142G3562 Punica granatum
PGSC0003DMG400000167 Solanum tuberosum
PGSC0003DMG400021647 Solanum tuberosum
Phvul.008G234900 Phaseolus vulgaris
Phvul.008G264900 Phaseolus vulgaris
Potri.001G440100 Populus trichocarpa
Potri.011G155700 Populus trichocarpa
Pp3c10_22940 Physcomitrium patens
Pp3c3_24850 Physcomitrium patens
Pp3c3_24900 Physcomitrium patens
Pp3c3_24910 Physcomitrium patens
PRCOL_00001809 Prasinoderma coloniale
Prupe.5G168200 Prunus persica
Prupe.6G342400 Prunus persica
Psat2g015400 Pisum sativum
PSO339G5217 Papaver somniferum
PSO384G4426 Papaver somniferum
QL03p043504 Quercus lobata
QL06p021586 Quercus lobata
RcHm_v2.0_Chr3g0451231 Rosa chinensis
RcHm_v2.0_Chr7g0192911 Rosa chinensis
Rhsim07G0192400 Rhododendron simsii
Rhsim07G0192600 Rhododendron simsii
Sabra11G0144100 Salix brachista
Sabra16G0297300 Salix brachista
SalBow1G7578 Salvia bowleyana
Sc10g0006890 Simmondsia chinensis
Sed0020090 Sechium edule
Sed0027177 Sechium edule
SEGI_08107 Sequoiadendron giganteum
SEGI_35791 Sequoiadendron giganteum
SGA_v2.0_scaffold163G38072 Striga asiatica
SGA_v2.0_scaffold169G38655 Striga asiatica
SHI20646 Sapria himalayana
SMO367G1222 Selaginella moellendorffii
Solyc01g094540.4 Solanum lycopersicum
Solyc05g049950.3 Solanum lycopersicum
Sopen01g038350 Solanum pennellii
Sopen05g028310 Solanum pennellii
Sp7g18800 Schrenkiella parvula
TAR633G2348 Trochodendron aralioides
THA.LOC104806243 Tarenaya hassleriana
THA.LOC104812077 Tarenaya hassleriana
Thecc.06G007600 Theobroma cacao
Thhalv10001000m.g Eutrema salsugineum
Thhalv10026002m.g Eutrema salsugineum
TPR.G12528 Trifolium pratense
TWI15G0591 Tripterygium wilfordii
unitig_736.g22531 Utricularia gibba
unitig_899.g14482 Utricularia gibba
VMungo0647G0361 Vigna mungo
Zm00001eb117150 Zea mays
Zm00001eb300870 Zea mays

User provided reference genes

Program Settings