Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A06p05250 Brassica napus
Aa31LG11G12710 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.1978 Anthoceros agrestis
Actinidia07195 Actinidia chinensis
Actinidia24158 Actinidia chinensis
Ah.01g004870 Amaranthus hybridus
Ah.09g226470 Amaranthus hybridus
Ah.13g066400 Amaranthus hybridus
AL1G18600 Arabidopsis lyrata
Aqoxy1G01033 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.53PLGZ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.5PQ0NB Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BYIB55 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.DSMN0K Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.EI6HBJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.SF2S3L Arachis hypogaea
AT1G08190 Arabidopsis thaliana
ATR0580G402 Amborella trichopoda
Atru.chr3.3491 Acer truncatum
AUR62024027 Chenopodium quinoa
AUR62024040 Chenopodium quinoa
AUR62024999 Chenopodium quinoa
AUR62040426 Chenopodium quinoa
AUR62040427 Chenopodium quinoa
BolC5t29388H Brassica oleracea
BraA06t23732Z Brassica rapa
C05p06320 Brassica napus
CAN.G1432.22 Capsicum annuum
CAN.G546.67 Capsicum annuum
CANSAT64G0962 Cannabis sativa
CARHR008020 Cardamine hirsuta
Carub.0001s0755 Capsella rubella
Ca_19327_v3 Cicer arietinum L.
CBR_g63066 Chara braunii
CBR_g75953 Chara braunii
Cc01_g10100 Coffea canephora
CDE09G0630 Ceratophyllum demersum
Cfa010128 Carpinus fangiana
Cfa022812 Carpinus fangiana
Ciclev10027764m.g Citrus clementina
CiPaw.13G143800 Carya illinoinensis
CiPaw.14G105700 Carya illinoinensis
ClCG00G003900 Citrullus lanatus
ClCG09G017560 Citrullus lanatus
COL.COLO4_19230 Corchorus olitorius
Cpa.g.sc47.25 Carica papaya
Cpa.g.sc47.26 Carica papaya
Cre03.g209281 Chlamydomonas reinhardtii
CsaV3_1G014360 Cucumis sativus L.
CSS0001832 Camellia sinensis var. sinensis
CSS0014729 Camellia sinensis var. sinensis
CSS0017290 Camellia sinensis var. sinensis
CSS0018078 Camellia sinensis var. sinensis
CSS0019611 Camellia sinensis var. sinensis
CSS0027626 Camellia sinensis var. sinensis
CSS0036642 Camellia sinensis var. sinensis
CSS0038043 Camellia sinensis var. sinensis
CSS0039906 Camellia sinensis var. sinensis
CSS0049530 Camellia sinensis var. sinensis
DCAR_006140 Daucus carota
DCAR_015496 Daucus carota
DCAR_018754 Daucus carota
DCAR_024781 Daucus carota
DCAR_031428 Daucus carota
Dinv12566 Davidia involucrata
Dinv29393 Davidia involucrata
Duzib168G1694 Durio zibethinus
Duzib170G1073 Durio zibethinus
ECA233G0170 Erigeron canadensis
EL10Ac9g20994 Beta vulgaris
Eucgr.B03911 Eucalyptus grandis
FAN11G2854 Fragaria x ananassa
FAN16G1431 Fragaria x ananassa
FAN21G1169 Fragaria x ananassa
FAN21G2323 Fragaria x ananassa
FAN21G3702 Fragaria x ananassa
FvH4_3g30370 Fragaria vesca
Glyma.11G191000 Glycine max
Glyma.12G083300 Glycine max
Gohir.A08G003200 Gossypium hirsutum
Gohir.A09G087400 Gossypium hirsutum
Gohir.D08G013600 Gossypium hirsutum
Gohir.D09G087100 Gossypium hirsutum
Gorai.004G007900 Gossypium raimondii
Gorai.006G103500 Gossypium raimondii
GSVIVG01004781001 Vitis vinifera
GSVIVG01024429001 Vitis vinifera
GSVIVG01031443001 Vitis vinifera
HanXRQChr13g0403561 Helianthus annuus
HanXRQChr15g0465621 Helianthus annuus
Haze_23510 Corylus avellana
Hma1.2p1_0051F.1_g029640 Hydrangea macrophylla
HPP92_012843 Vanilla planifolia
HPP92_012850 Vanilla planifolia
Hund00856 Selenicereus undatus
Lalb_Chr03g0027821 Lupinus albus
Lalb_Chr22g0350471 Lupinus albus
Lj1A216G25 Lonicera japonica
Lj1C215T10 Lonicera japonica
Lj3g0020816 Lotus japonicus
Lj3g0026116 Lotus japonicus
Lsat_1_v5_gn_6_42140 Lactuca sativa
Manes.04G011800 Manihot esculenta
Manes.11G154100 Manihot esculenta
Mapoly0052s0123 Marchantia polymorpha
Mapoly0052s0125 Marchantia polymorpha
MCO08G243 Micromonas commoda
MD03G1129800 Malus domestica
MD11G1151700 Malus domestica
Medtr4g056480 Medicago truncatula
MELO3C004827.2 Cucumis melo
Migut.N02533 Erythranthe guttata
Nitab4.5_0000173g0320 Nicotiana tabacum
Nitab4.5_0003470g0120 Nicotiana tabacum
Nitab4.5_0004517g0020 Nicotiana tabacum
Nn2g13909 Nelumbo nucifera
Nn2g15995 Nelumbo nucifera
Nn2g15996 Nelumbo nucifera
Nn6g32817 Nelumbo nucifera
Nn6g35161 Nelumbo nucifera
Nn6g35165 Nelumbo nucifera
Oeu000610.1 Olea europaea
Oeu035522.1 Olea europaea
Os04g0195000 Oryza sativa ssp. japonica
Peaxi162Scf00114g00310 Petunia axillaris
Peaxi162Scf00150g00213 Petunia axillaris
PGR102G1149 Punica granatum
Phvul.011G088100 Phaseolus vulgaris
Potri.001G212700 Populus trichocarpa
Potri.009G002400 Populus trichocarpa
Pp3c15_14510 Physcomitrium patens
Pp3c9_21930 Physcomitrium patens
PRCOL_00006500 Prasinoderma coloniale
Prupe.6G114800 Prunus persica
Psat7g191520 Pisum sativum
PSO017G1218 Papaver somniferum
PSO063G7392 Papaver somniferum
PSO339G1674 Papaver somniferum
PSO339G5439 Papaver somniferum
QL01p014586 Quercus lobata
QL03p064641 Quercus lobata
QL03p064651 Quercus lobata
RcHm_v2.0_Chr5g0056291 Rosa chinensis
RcHm_v2.0_Chr5g0056311 Rosa chinensis
Rhsim13G0102400 Rhododendron simsii
Sabra04G0148600 Salix brachista
Sabra09G0001100 Salix brachista
SalBow3G1938 Salvia bowleyana
Sc21g0003980 Simmondsia chinensis
Sed0022437 Sechium edule
SEGI_35272 Sequoiadendron giganteum
SGA_v2.0_scaffold83G26445 Striga asiatica
SHI06192 Sapria himalayana
SMO118G0273 Selaginella moellendorffii
SMO266G0036 Selaginella moellendorffii
SMO297G0006 Selaginella moellendorffii
SMO367G0752 Selaginella moellendorffii
Solyc06g074740.3 Solanum lycopersicum
Solyc11g066560.3 Solanum lycopersicum
Sopen06g031150 Solanum pennellii
Sopen11g026300 Solanum pennellii
Sp1g06840 Schrenkiella parvula
TAR369G0287 Trochodendron aralioides
TAR623G0647 Trochodendron aralioides
THA.LOC104800566 Tarenaya hassleriana
Thecc.09G295700 Theobroma cacao
Thhalv10006697m.g Eutrema salsugineum
TPR.G35046 Trifolium pratense
TWI75G0171 Tripterygium wilfordii
TWI75G0356 Tripterygium wilfordii
TWI79G0622 Tripterygium wilfordii
unitig_22.g5654 Utricularia gibba
vmacro03244 Vaccinium macrocarpon
VMungo1127G0886 Vigna mungo
Zm00001eb043500 Zea mays
Zm00001eb057600 Zea mays
Zm00001eb066510 Zea mays
Zm00001eb157910 Zea mays
Zm00001eb222800 Zea mays
Zm00001eb291510 Zea mays
Zm00001eb291520 Zea mays
Zm00001eb364150 Zea mays

User provided reference genes

Program Settings