Gene: CiPaw.13G143800

General Information

Structural Information

Species Carya illinoinensis
Gene Identifier CiPaw.13G143800
Transcript Identifier CiPaw.13G143800.1
Gene Type Coding gene
Location Chr13 : 28309424-28331594 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D003791
#Genes/#Species 182/96
Phylogenetic origin

ID ORTHO05D004961
#Genes/#Species 167/96
Phylogenetic origin

Gene Duplication Information

Block Duplication Block duplicate

Labels

Identifiers

id CiPaw.13G143800.v1.1
pacid 45812980
locus Caril.13G142400

Descriptions

Short descriptions
Ortholog descriptions

Description PF00637 - Region in Clathrin and VPS (Clathrin)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006886	IEA	InterPro	intracellular protein transport
GO:0016192	IEA	InterPro	vesicle-mediated transport
GO:0006623	IEA	InterPro	protein targeting to vacuole
GO:0046907	IEA	InterPro	intracellular transport
GO:0009630	ISO	PLAZA Integrative Orthology	gravitropism	AT1G08190

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0030897	ISO	PLAZA Integrative Orthology	HOPS complex	AT1G08190

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR015943	WD40/YVTN repeat-like-containing domain superfamily
IPR000547	Clathrin, heavy chain/VPS, 7-fold repeat
IPR045111	Vacuolar protein sorting-associated protein Vps41/Vps8
IPR016902	Vacuolar protein sorting-associated protein 41
IPR011047	Quinoprotein alcohol dehydrogenase-like superfamily
IPR001680	WD40 repeat
IPR011990	Tetratricopeptide-like helical domain superfamily

Mapman id	Description
22.3.4.9.6	Vesicle trafficking.post-Golgi trafficking.vesicle tethering.HOPS/CORVET tethering complexes.HOPS-specific component VPS41/VAM2