Gene: Solyc11g066560.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc11g066560.3
  • Transcript Identifier Solyc11g066560.3.1
  • Gene Type Coding gene
  • Location SL4.0ch11 : 50346981-50359134 : positive

Gene Family Information

  • ID HOM05D003791
  • #Genes/#Species 182/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc11g066560.3.1
  • uniprot A0A3Q7IZP9
  • gene_id Solyc11g066560

Descriptions

  • Description Vacuolar protein sorting-associated protein 41 homolog (AHRD V3.3 *** A0A2G2YHK9_CAPAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009630
ISO
PLAZA Integrative Orthologygravitropism AT1G08190
GO:0016236
IBA
GOA Databasemacroautophagy
GO:0034058
IBA
GOA Databaseendosomal vesicle fusion
GO:0009267
IBA
GOA Databasecellular response to starvation
GO:0006623
IBA
IEA
GOA Databaseprotein targeting to vacuole
GO:0006623
IEA
InterProprotein targeting to vacuole
GO:0016192
IEA
GOA Databasevesicle-mediated transport
GO:0016192
IEA
InterProvesicle-mediated transport
GO:0006886
IEA
GOA Databaseintracellular protein transport
GO:0006886
IEA
InterProintracellular protein transport
GO:0046907
IEA
InterProintracellular transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0020037
IEA
GOA Databaseheme binding
GO:0005506
IEA
GOA Databaseiron ion binding
GO:0005515
IEA
InterProprotein binding
GO:0016705
IEA
GOA Databaseoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0004497
IEA
GOA Databasemonooxygenase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005770
IBA
GOA Databaselate endosome
GO:0030897
IBA
GOA DatabaseHOPS complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR001841 Zinc finger, RING-type
IPR000547 Clathrin, heavy chain/VPS, 7-fold repeat
IPR016902 Vacuolar protein sorting-associated protein 41
IPR036322 WD40-repeat-containing domain superfamily
IPR001680 WD40 repeat
IPR045111 Vacuolar protein sorting-associated protein Vps41/Vps8
IPR011990 Tetratricopeptide-like helical domain superfamily
Mapman id Description
22.3.4.9.6 Vesicle trafficking.post-Golgi trafficking.vesicle tethering.HOPS/CORVET tethering complexes.HOPS-specific component VPS41/VAM2