Gene: arahy.Tifrunner.gnm1.ann1.SF2S3L

General Information

Structural Information

  • Species Arachis hypogaea
  • Gene Identifier arahy.Tifrunner.gnm1.ann1.SF2S3L
  • Transcript Identifier arahy.Tifrunner.gnm1.ann1.SF2S3L.1
  • Gene Type Coding gene
  • Location arahy.Tifrunner.gnm1.Arahy.13 : 145304263-145312713 : positive

Gene Family Information

  • ID HOM05D003791
  • #Genes/#Species 182/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id arahy.Tifrunner.gnm1.ann1.SF2S3L.v1.0
  • pacid 42612539

Descriptions

  • Description PF08608 - Wyosine base formation (Wyosine_form)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006623
IEA
InterProprotein targeting to vacuole
GO:0016192
ISO
PLAZA Homology (enrichment)vesicle-mediated transport HOM05D003791
GO:0046907
ISO
PLAZA Homology (enrichment)intracellular transport HOM05D003791
GO:0009630
ISO
PLAZA Integrative Orthologygravitropism AT1G08190
GO:0006886
ISO
PLAZA Homology (enrichment)intracellular protein transport HOM05D003791

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003824
IEA
InterProcatalytic activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030897
ISO
PLAZA Integrative OrthologyHOPS complex AT1G08190

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR001680 WD40 repeat
IPR045111 Vacuolar protein sorting-associated protein Vps41/Vps8
IPR036322 WD40-repeat-containing domain superfamily
IPR013917 tRNA wybutosine-synthesis
IPR013785 Aldolase-type TIM barrel
Mapman id Description
22.3.4.9.6 Vesicle trafficking.post-Golgi trafficking.vesicle tethering.HOPS/CORVET tethering complexes.HOPS-specific component VPS41/VAM2