Gene: Solyc06g074740.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc06g074740.3
  • Transcript Identifier Solyc06g074740.3.1
  • Gene Type Coding gene
  • Location SL4.0ch06 : 43943393-43953918 : negative

Gene Family Information

  • ID HOM05D003791
  • #Genes/#Species 182/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc06g074740.3.1
  • uniprot P93231
  • gene_id Solyc06g074740

Descriptions

  • Description LEU86662 VPS41
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016192
IEA
GOA Databasevesicle-mediated transport
GO:0016192
IEA
InterProvesicle-mediated transport
GO:0009630
IEA
GOA Databasegravitropism
GO:0016236
IBA
GOA Databasemacroautophagy
GO:0034058
IBA
GOA Databaseendosomal vesicle fusion
GO:0009267
IBA
GOA Databasecellular response to starvation
GO:0006623
IBA
IEA
GOA Databaseprotein targeting to vacuole
GO:0006623
IEA
InterProprotein targeting to vacuole
GO:0006886
IEA
GOA Databaseintracellular protein transport
GO:0006886
IEA
InterProintracellular protein transport
GO:0046907
IEA
GOA Databaseintracellular transport
GO:0046907
IEA
InterProintracellular transport
GO:0015031
IEA
GOA Databaseprotein transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0030897
IBA
IEA
GOA DatabaseHOPS complex
GO:0005770
IBA
GOA Databaselate endosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000547 Clathrin, heavy chain/VPS, 7-fold repeat
IPR001680 WD40 repeat
IPR015943 WD40/YVTN repeat-like-containing domain superfamily
IPR016902 Vacuolar protein sorting-associated protein 41
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR036322 WD40-repeat-containing domain superfamily
IPR045111 Vacuolar protein sorting-associated protein Vps41/Vps8
Mapman id Description
22.3.4.9.6 Vesicle trafficking.post-Golgi trafficking.vesicle tethering.HOPS/CORVET tethering complexes.HOPS-specific component VPS41/VAM2