Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A08p06460 Brassica napus
Aa31LG6G9950 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_368.3328 Anthoceros agrestis
Actinidia10635 Actinidia chinensis
Actinidia29542 Actinidia chinensis
Ah.02g123810 Amaranthus hybridus
Ah.05g168100 Amaranthus hybridus
AL1G51590 Arabidopsis lyrata
Aqoxy2G00397 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.9CFF48 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.BQ9MTK Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.K61U57 Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.LGJ4PH Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.M2ZNIJ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.NR2FSQ Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.RF14FM Arachis hypogaea
AT1G43190 Arabidopsis thaliana
ATR0115G003 Amborella trichopoda
ATR1126G056 Amborella trichopoda
Atru.chr13.2064 Acer truncatum
AUR62003637 Chenopodium quinoa
AUR62017947 Chenopodium quinoa
AUR62026677 Chenopodium quinoa
AUR62040585 Chenopodium quinoa
BcaB04g17624 Brassica carinata
BcaC07g37311 Brassica carinata
BolC8t47590H Brassica oleracea
BraA08t32655Z Brassica rapa
C08p07450 Brassica napus
CANSAT25G0465 Cannabis sativa
CARHR035330 Cardamine hirsuta
Carub.0001s3449 Capsella rubella
Carub.0001s4466 Capsella rubella
Ca_04511_v3 Cicer arietinum L.
Ca_10675_v3 Cicer arietinum L.
CBR_g7995 Chara braunii
Cc04_g09690 Coffea canephora
CDE06G0083 Ceratophyllum demersum
CDE08G0132 Ceratophyllum demersum
Cfa002795 Carpinus fangiana
Cfa018305 Carpinus fangiana
Ciclev10001148m.g Citrus clementina
CiPaw.04G088200 Carya illinoinensis
CiPaw.15G014400 Carya illinoinensis
CiPaw.16G009800 Carya illinoinensis
ClCG08G002590 Citrullus lanatus
COL.COLO4_03566 Corchorus olitorius
Cpa.g.sc49.99 Carica papaya
CsaV3_6G002770 Cucumis sativus L.
CSS0004235 Camellia sinensis var. sinensis
CSS0012462 Camellia sinensis var. sinensis
CSS0029787 Camellia sinensis var. sinensis
CSS0039159 Camellia sinensis var. sinensis
CSS0049572 Camellia sinensis var. sinensis
DCAR_014445 Daucus carota
Dinv25885 Davidia involucrata
Duzib093G0739 Durio zibethinus
Duzib116G0668 Durio zibethinus
ECA232G0053 Erigeron canadensis
EL10Ac1g01585 Beta vulgaris
EL10Ac6g15237 Beta vulgaris
Eucgr.F02695 Eucalyptus grandis
Eucgr.F04205 Eucalyptus grandis
FAN15G3239 Fragaria x ananassa
FAN20G0358 Fragaria x ananassa
FAN24G3173 Fragaria x ananassa
FAN27G0365 Fragaria x ananassa
FvH4_2g13280 Fragaria vesca
Glyma.02G080500 Glycine max
Glyma.10G223300 Glycine max
Glyma.16G165000 Glycine max
Glyma.20G168400 Glycine max
Gohir.A02G063500 Gossypium hirsutum
Gohir.D02G069100 Gossypium hirsutum
Gohir.D12G093233 Gossypium hirsutum
Gorai.005G078200 Gossypium raimondii
GSVIVG01022282001 Vitis vinifera
GSVIVG01034558001 Vitis vinifera
HanXRQChr05g0144181 Helianthus annuus
Haze_17786 Corylus avellana
Haze_25093 Corylus avellana
HPP92_001089 Vanilla planifolia
HPP92_001090 Vanilla planifolia
HPP92_002768 Vanilla planifolia
Hund19618 Selenicereus undatus
Hund26682 Selenicereus undatus
Lalb_Chr02g0141481 Lupinus albus
Lalb_Chr06g0161681 Lupinus albus
Lalb_Chr19g0130191 Lupinus albus
Lalb_Chr19g0130201 Lupinus albus
Lalb_Chr21g0305541 Lupinus albus
Lj2g0008478 Lotus japonicus
Lj5g0027187 Lotus japonicus
Lj7C377G3 Lonicera japonica
Lj8C37T13 Lonicera japonica
Lsat_1_v5_gn_9_41940 Lactuca sativa
Manes.02G181600 Manihot esculenta
Manes.18G093400 Manihot esculenta
Mapoly0001s0481 Marchantia polymorpha
Mapoly0051s0071 Marchantia polymorpha
MBI09_g02184_MAGBIO Magnolia biondii
MBI12_g31231_MAGBIO Magnolia biondii
MBI14_g18953_MAGBIO Magnolia biondii
MBI16_g07738_MAGBIO Magnolia biondii
MBI17_g01629_MAGBIO Magnolia biondii
MD00G1066200 Malus domestica
MD00G1066300 Malus domestica
MD04G1044700 Malus domestica
Medtr1g098530 Medicago truncatula
Medtr6g037510 Medicago truncatula
Medtr6g037520 Medicago truncatula
Medtr6g037540 Medicago truncatula
Medtr6g037550 Medicago truncatula
Medtr6g043520 Medicago truncatula
Medtr8g072130 Medicago truncatula
MELO3C024993.2 Cucumis melo
Migut.K00003 Erythranthe guttata
Nitab4.5_0002445g0040 Nicotiana tabacum
Nitab4.5_0003909g0020 Nicotiana tabacum
Nitab4.5_0010347g0020 Nicotiana tabacum
Nn1g06041 Nelumbo nucifera
Nn5g28791 Nelumbo nucifera
Nn6g35013 Nelumbo nucifera
Os01g0867800 Oryza sativa ssp. japonica
Os02g0789700 Oryza sativa ssp. japonica
Os05g0349000 Oryza sativa ssp. japonica
Os05g0437300 Oryza sativa ssp. japonica
Os11g0608000 Oryza sativa ssp. japonica
Peaxi162Scf00076g00821 Petunia axillaris
Peaxi162Scf00249g00068 Petunia axillaris
PGR042G1308 Punica granatum
PGSC0003DMG400018824 Solanum tuberosum
PGSC0003DMG400023660 Solanum tuberosum
Phvul.004G092400 Phaseolus vulgaris
Phvul.007G081900 Phaseolus vulgaris
Potri.002G066000 Populus trichocarpa
Potri.005G194700 Populus trichocarpa
Pp3c14_14100 Physcomitrium patens
Pp3c14_17110 Physcomitrium patens
Prupe.8G036700 Prunus persica
Psat1g100400 Pisum sativum
Psat6g192160 Pisum sativum
PSO170G1597 Papaver somniferum
PSO541G1407 Papaver somniferum
PSO541G6276 Papaver somniferum
PSO675G0161 Papaver somniferum
PSO675G7282 Papaver somniferum
PSO700G0143 Papaver somniferum
QL02p037730 Quercus lobata
QL02p037738 Quercus lobata
QL02p038708 Quercus lobata
QL06p031237 Quercus lobata
QL06p031240 Quercus lobata
RcHm_v2.0_Chr6g0274691 Rosa chinensis
Sabra02G0052700 Salix brachista
Sabra05G0148200 Salix brachista
SalBow1G1267 Salvia bowleyana
Sc02g0004440 Simmondsia chinensis
Sc04g0006840 Simmondsia chinensis
Sc07g0005070 Simmondsia chinensis
Sc07g0005580 Simmondsia chinensis
Sc07g0005590 Simmondsia chinensis
Sc09g0007220 Simmondsia chinensis
Sc12g0007970 Simmondsia chinensis
Sc13g0006810 Simmondsia chinensis
Sc15g0003120 Simmondsia chinensis
Sc16g0004050 Simmondsia chinensis
Sc16g0004730 Simmondsia chinensis
Sc17g0002610 Simmondsia chinensis
Sc25g0003800 Simmondsia chinensis
Sed0013690 Sechium edule
Sed0017554 Sechium edule
SEGI_27673 Sequoiadendron giganteum
SGA_v2.0_scaffold274G46519 Striga asiatica
SMO146G0032 Selaginella moellendorffii
SMO146G0120 Selaginella moellendorffii
SMO171G0059 Selaginella moellendorffii
SMO171G0107 Selaginella moellendorffii
SMO196G0024 Selaginella moellendorffii
Solyc10g080720.2 Solanum lycopersicum
Solyc12g019750.3 Solanum lycopersicum
Sopen10g031260 Solanum pennellii
Sopen12g010100 Solanum pennellii
Sp1g32390 Schrenkiella parvula
TAR376G0277 Trochodendron aralioides
TAR628G0869 Trochodendron aralioides
THA.LOC104804671 Tarenaya hassleriana
THA.LOC104809206 Tarenaya hassleriana
Thecc.08G155500 Theobroma cacao
Thhalv10004261m.g Eutrema salsugineum
TPR.G17034 Trifolium pratense
TPR.G28006 Trifolium pratense
TPR.G28008 Trifolium pratense
TPR.G28012 Trifolium pratense
TPR.G40579 Trifolium pratense
TWI34G1705 Tripterygium wilfordii
TWI60G0696 Tripterygium wilfordii
vmacro01482 Vaccinium macrocarpon
VMungo0464G0875 Vigna mungo
VMungo0720G1662 Vigna mungo
Zm00001eb289150 Zea mays
Zm00001eb348540 Zea mays

User provided reference genes

Program Settings