Gene: Cc04_g09690

General Information

Structural Information

  • Species Coffea canephora
  • Gene Identifier Cc04_g09690
  • Transcript Identifier Cc04_g09690.1
  • Gene Type Coding gene
  • Location chr4 : 8745380-8753175 : negative

Gene Family Information

  • ID HOM05D003387
  • #Genes/#Species 202/90
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • UniProtKB P26599
  • UniProtKB D7KMW6
  • UniProtKB C0J4I8
  • UniProtKB D7SRE5
  • UniProtKB Q8BHD7
  • UniProtKB Q6ICX4
  • id GSCOCG00005606001

Descriptions

  • Description Polypyrimidine tract-binding protein homolog 3
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006417
ISO
PLAZA Integrative Orthologyregulation of translation AT1G43190
GO:0043484
ISO
PLAZA Integrative Orthologyregulation of RNA splicing AT1G43190

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G43190

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G43190
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT1G43190
GO:0000932
ISO
PLAZA Integrative OrthologyP-body AT1G43190

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035979 RNA-binding domain superfamily
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR000504 RNA recognition motif domain
IPR034795 PTBPH3, RNA recognition motif 1
IPR034797 PTBPH3, RNA recognition motif 3
IPR021790 PTBP1, RNA recognition motif 2-like
Mapman id Description
35.1 not assigned.annotated