Gene: CiPaw.16G009800

General Information

Structural Information

  • Species Carya illinoinensis
  • Gene Identifier CiPaw.16G009800
  • Transcript Identifier CiPaw.16G009800.1
  • Gene Type Coding gene
  • Location Chr16 : 1194075-1200382 : negative

Gene Family Information

  • ID HOM05D003387
  • #Genes/#Species 202/90
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id CiPaw.16G009800.v1.1
  • pacid 45843543
  • locus Caril.16G009500

Descriptions

  • Description PTHR24012:SF432 - HEPHAESTUS
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006397
IEA
InterPromRNA processing
GO:0006417
ISO
PLAZA Integrative Orthologyregulation of translation AT1G43190
GO:0043484
ISO
PLAZA Integrative Orthologyregulation of RNA splicing AT1G43190

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
InterProRNA binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G43190

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
InterPronucleus
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT1G43190
GO:0000932
ISO
PLAZA Integrative OrthologyP-body AT1G43190

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR021790 PTBP1, RNA recognition motif 2-like
IPR034797 PTBPH3, RNA recognition motif 3
IPR006536 HnRNP-L/PTB
IPR000504 RNA recognition motif domain
IPR034795 PTBPH3, RNA recognition motif 1
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 RNA-binding domain superfamily
IPR034796 PTBPH3, RNA recognition motif 2
Mapman id Description
35.1 not assigned.annotated