Gene: Solyc12g019750.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc12g019750.3
  • Transcript Identifier Solyc12g019750.3.1
  • Gene Type Coding gene
  • Location SL4.0ch12 : 11429766-11430778 : negative

Gene Family Information

  • ID HOM05D003387
  • #Genes/#Species 202/90
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc12g019750.3.1
  • uniprot A0A3Q7J6P4
  • gene_id Solyc12g019750

Descriptions

  • Description polypyrimidine tract-binding protein homolog 3 (AHRD V3.3 *** A0A2I4DWZ5_9ROSI)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006397
IEA
GOA DatabasemRNA processing
GO:0043484
IBA
GOA Databaseregulation of RNA splicing
GO:0006417
ISO
PLAZA Integrative Orthologyregulation of translation AT1G43190

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003729
IBA
GOA DatabasemRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
IEA
GOA Databasenucleus
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT1G43190
GO:0000932
ISO
PLAZA Integrative OrthologyP-body AT1G43190

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 RNA-binding domain superfamily
IPR000504 RNA recognition motif domain
Mapman id Description
35.1 not assigned.annotated