Gene: Cfa018305
General Information
Structural Information
- Species Carpinus fangiana
- Gene Identifier Cfa018305
- Transcript Identifier Cfa018305.t1
- Gene Type Coding gene
- Location Cfa07 : 33301463-33306025 : negative
Gene Family Information
- ID HOM05D003387
- #Genes/#Species 202/90
- Phylogenetic origin
- ID ORTHO05D005400
- #Genes/#Species 158/90
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Cfa018305.t1
Descriptions
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006397 | IEA | InterPro | mRNA processing | |
| GO:0006417 | ISO | PLAZA Integrative Orthology | regulation of translation | AT1G43190 |
| GO:0043484 | ISO | PLAZA Integrative Orthology | regulation of RNA splicing | AT1G43190 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT1G43190 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | InterPro | nucleus | |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT1G43190 |
| GO:0000932 | ISO | PLAZA Integrative Orthology | P-body | AT1G43190 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR034797 | PTBPH3, RNA recognition motif 3 |
| IPR035979 | RNA-binding domain superfamily |
| IPR034796 | PTBPH3, RNA recognition motif 2 |
| IPR021790 | PTBP1, RNA recognition motif 2-like |
| IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| IPR000504 | RNA recognition motif domain |
| IPR006536 | HnRNP-L/PTB |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |