Gene: CiPaw.15G014400
General Information
Structural Information
- Species Carya illinoinensis
- Gene Identifier CiPaw.15G014400
- Transcript Identifier CiPaw.15G014400.1
- Gene Type Coding gene
- Location Chr15 : 2095604-2104181 : negative
Gene Family Information
- ID HOM05D003387
- #Genes/#Species 202/90
- Phylogenetic origin
- ID ORTHO05D005400
- #Genes/#Species 158/90
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id CiPaw.15G014400.v1.1
- pacid 45814571
- locus Caril.15G013300
Descriptions
- Description PTHR24012:SF376 - POLYPYRIMIDINE TRACT-BINDING PROTEIN 3
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0006397 | IEA | InterPro | mRNA processing | |
GO:0006417 | ISO | PLAZA Integrative Orthology | regulation of translation | AT1G43190 |
GO:0043484 | ISO | PLAZA Integrative Orthology | regulation of RNA splicing | AT1G43190 |
Molecular Function
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0003676 | IEA | InterPro | nucleic acid binding | |
GO:0003723 | IEA | InterPro | RNA binding | |
GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | AT1G43190 |
Cellular Component
GO term | Evidence(s) | Provider(s) | Description | Source(s) |
---|---|---|---|---|
GO:0005634 | IEA | InterPro | nucleus | |
GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | AT1G43190 |
GO:0000932 | ISO | PLAZA Integrative Orthology | P-body | AT1G43190 |
Color Legend
Experimental Evidence |
Computational Reviewed Evidence |
Electronic Evidence |
InterPro | Description |
---|---|
IPR035979 | RNA-binding domain superfamily |
IPR034796 | PTBPH3, RNA recognition motif 2 |
IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
IPR006536 | HnRNP-L/PTB |
IPR000504 | RNA recognition motif domain |
IPR021790 | PTBP1, RNA recognition motif 2-like |
IPR034795 | PTBPH3, RNA recognition motif 1 |
Mapman id | Description |
---|---|
35.1 | not assigned.annotated |