Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Organism
A05p37390 Brassica napus
Aa31LG3G5540 Aethionema arabicum
Aa31sc238G10 Aethionema arabicum
AagrBONN_evm.TU.Sc2ySwM_340.243 Anthoceros agrestis
Actinidia05786 Actinidia chinensis
Actinidia30948 Actinidia chinensis
Actinidia38605 Actinidia chinensis
Actinidia38606 Actinidia chinensis
Ah.15g091410 Amaranthus hybridus
Ah.15g091660 Amaranthus hybridus
AL3G23570 Arabidopsis lyrata
Aqoxy2G02393 Aquilegia oxysepala
Aqoxy4G00694 Aquilegia oxysepala
arahy.Tifrunner.gnm1.ann1.PL5CUR Arachis hypogaea
arahy.Tifrunner.gnm1.ann1.S31791 Arachis hypogaea
AT3G11964 Arabidopsis thaliana
ATR0737G016 Amborella trichopoda
Atru.chr8.1220 Acer truncatum
AUR62026957 Chenopodium quinoa
AUR62041562 Chenopodium quinoa
AUR62041563 Chenopodium quinoa
BcaB04g21101 Brassica carinata
BcaB06g25562 Brassica carinata
BcaC05g29306 Brassica carinata
BcaC09g48184 Brassica carinata
BolC1t05277H Brassica oleracea
BolC5t34262H Brassica oleracea
BraA01t04149Z Brassica rapa
BraA05t22538Z Brassica rapa
C01p44070 Brassica napus
C03p89180 Brassica napus
C05p55950 Brassica napus
CAN.G1433.26 Capsicum annuum
CAN.G1433.27 Capsicum annuum
CAN.G2759.1 Capsicum annuum
CAN.G317.10 Capsicum annuum
CAN.G317.8 Capsicum annuum
CAN.G317.9 Capsicum annuum
CAN.G479.45 Capsicum annuum
CANSAT64G2741 Cannabis sativa
CARHR086520 Cardamine hirsuta
Carub.0003s1130 Capsella rubella
Ca_25942_v3 Cicer arietinum L.
CBR_g22381 Chara braunii
Cc06_g23250 Coffea canephora
CDE02G0114 Ceratophyllum demersum
CDE02G2929 Ceratophyllum demersum
Cfa020115 Carpinus fangiana
Cfa023914 Carpinus fangiana
Ciclev10013867m.g Citrus clementina
CiPaw.08G134600 Carya illinoinensis
CiPaw.08G134900 Carya illinoinensis
ClCG04G001230 Citrullus lanatus
COL.COLO4_29434 Corchorus olitorius
Cpa.g.sc85.20 Carica papaya
Cpa.g.sc85.24 Carica papaya
Cpa.g.sc85.25 Carica papaya
Cre10.g428750 Chlamydomonas reinhardtii
CsaV3_4G031200 Cucumis sativus L.
CSS0008153 Camellia sinensis var. sinensis
CSS0010787 Camellia sinensis var. sinensis
CSS0040264 Camellia sinensis var. sinensis
CSS0042321 Camellia sinensis var. sinensis
CSS0043330 Camellia sinensis var. sinensis
DCAR_016871 Daucus carota
Dinv25019 Davidia involucrata
Dinv25021 Davidia involucrata
Duzib128G1871 Durio zibethinus
ECA238G1915 Erigeron canadensis
EL10Ac7g16694 Beta vulgaris
Eucgr.A02507 Eucalyptus grandis
FAN02G0008 Fragaria x ananassa
FAN05G0820 Fragaria x ananassa
FAN05G2723 Fragaria x ananassa
FAN09G2861 Fragaria x ananassa
FAN14G4107 Fragaria x ananassa
FvH4_6g21470 Fragaria vesca
Glyma.02G168900 Glycine max
Glyma.09G104000 Glycine max
Gohir.A09G130300 Gossypium hirsutum
Gohir.D01G126601 Gossypium hirsutum
Gohir.D05G345851 Gossypium hirsutum
Gohir.D06G091175 Gossypium hirsutum
Gohir.D08G094800 Gossypium hirsutum
Gohir.D09G126300 Gossypium hirsutum
Gohir.D10G054000 Gossypium hirsutum
Gohir.D12G128000 Gossypium hirsutum
Gorai.003G012400 Gossypium raimondii
Gorai.005G060000 Gossypium raimondii
Gorai.006G145100 Gossypium raimondii
Gorai.007G198500 Gossypium raimondii
Gorai.011G237200 Gossypium raimondii
Gorai.012G168200 Gossypium raimondii
GSVIVG01033430001 Vitis vinifera
HanXRQChr13g0388021 Helianthus annuus
HanXRQChr13g0419181 Helianthus annuus
HanXRQChr14g0457761 Helianthus annuus
Haze_20072 Corylus avellana
HPP92_015876 Vanilla planifolia
HPP92_015877 Vanilla planifolia
HPP92_015878 Vanilla planifolia
HPP92_015879 Vanilla planifolia
HPP92_027316 Vanilla planifolia
HPP92_027317 Vanilla planifolia
HPP92_027318 Vanilla planifolia
Hund18979 Selenicereus undatus
Hund18981 Selenicereus undatus
Hund18982 Selenicereus undatus
Hund18983 Selenicereus undatus
Hund18985 Selenicereus undatus
Hund19218 Selenicereus undatus
Hund19220 Selenicereus undatus
Hund30424 Selenicereus undatus
Lalb_Chr21g0316111 Lupinus albus
Lj2C361G9 Lonicera japonica
Lj5g0006535 Lotus japonicus
Lsat_1_v5_gn_2_58000 Lactuca sativa
Lsat_1_v5_gn_5_134001 Lactuca sativa
Lsat_1_v5_gn_5_134021 Lactuca sativa
Lsat_1_v5_gn_7_25100 Lactuca sativa
Lsat_1_v5_gn_7_76181 Lactuca sativa
Lsat_1_v5_gn_7_92520 Lactuca sativa
Lsat_1_v5_gn_8_160881 Lactuca sativa
Lsat_1_v5_gn_8_97781 Lactuca sativa
Manes.09G040300 Manihot esculenta
Mapoly0019s0051 Marchantia polymorpha
MD12G1051100 Malus domestica
MD14G1049800 Malus domestica
MD14G1050000 Malus domestica
MD14G1050200 Malus domestica
MD14G1050300 Malus domestica
Medtr1g054710 Medicago truncatula
Medtr3g069250 Medicago truncatula
MELO3C008994.2 Cucumis melo
Migut.K00013 Erythranthe guttata
MSTRG.26730 Avicennia marina
Nitab4.5_0000571g0080 Nicotiana tabacum
Nitab4.5_0000571g0110 Nicotiana tabacum
Nitab4.5_0001364g0070 Nicotiana tabacum
Nitab4.5_0001364g0080 Nicotiana tabacum
Oeu046733.1 Olea europaea
Os07g0203275 Oryza sativa ssp. japonica
Os07g0203300 Oryza sativa ssp. japonica
Peaxi162Scf00045g00223 Petunia axillaris
PGR004G2129 Punica granatum
PGSC0003DMG400008644 Solanum tuberosum
Phvul.007G270000 Phaseolus vulgaris
Potri.016G062600 Populus trichocarpa
Pp3c4_30330 Physcomitrium patens
PRCOL_00005658 Prasinoderma coloniale
Prupe.7G085700 Prunus persica
Psat0s11355g0040 Pisum sativum
Psat2g048720 Pisum sativum
Psat6g109960 Pisum sativum
Psat7g030280 Pisum sativum
PSO170G5032 Papaver somniferum
PSO210G4351 Papaver somniferum
PSO339G0479 Papaver somniferum
PSO384G1659 Papaver somniferum
PSO384G3517 Papaver somniferum
PSO729G0038 Papaver somniferum
QL07p025506 Quercus lobata
QL07p025530 Quercus lobata
RcHm_v2.0_Chr3g0478661 Rosa chinensis
Rhsim04G0093500 Rhododendron simsii
Sabra16G0064500 Salix brachista
Sabra16G0064600 Salix brachista
SalBow1G2678 Salvia bowleyana
Sc19g0006250 Simmondsia chinensis
Sed0016761 Sechium edule
SEGI_01045 Sequoiadendron giganteum
SEGI_22431 Sequoiadendron giganteum
SEGI_28328 Sequoiadendron giganteum
SEGI_29966 Sequoiadendron giganteum
SEGI_32968 Sequoiadendron giganteum
SEGI_33580 Sequoiadendron giganteum
SGA_v2.0_scaffold274G46506 Striga asiatica
SHI30029 Sapria himalayana
SHI30031 Sapria himalayana
SHI30032 Sapria himalayana
SMO083G0001 Selaginella moellendorffii
SMO083G0010 Selaginella moellendorffii
SMO111G0027 Selaginella moellendorffii
SMO111G0064 Selaginella moellendorffii
SMO111G0100 Selaginella moellendorffii
SMO111G0113 Selaginella moellendorffii
SMO111G0153 Selaginella moellendorffii
SMO111G0226 Selaginella moellendorffii
SMO137G0021 Selaginella moellendorffii
SMO140G0012 Selaginella moellendorffii
SMO140G0060 Selaginella moellendorffii
SMO140G0066 Selaginella moellendorffii
SMO140G0090 Selaginella moellendorffii
SMO160G0005 Selaginella moellendorffii
SMO200G0255 Selaginella moellendorffii
SMO215G0003 Selaginella moellendorffii
Solyc03g051900.4 Solanum lycopersicum
Sopen03g011350 Solanum pennellii
Sp3g10190 Schrenkiella parvula
TAR633G1132 Trochodendron aralioides
THA.LOC104826779 Tarenaya hassleriana
Thecc.05G180200 Theobroma cacao
Thhalv10019877m.g Eutrema salsugineum
TPR.G14502 Trifolium pratense
TWI53G1521 Tripterygium wilfordii
TWI74G0321 Tripterygium wilfordii
TWI74G1605 Tripterygium wilfordii
unitig_744.g24086 Utricularia gibba
unitig_744.g24087 Utricularia gibba
vmacro09128 Vaccinium macrocarpon
vmacro22127 Vaccinium macrocarpon
vmacro22129 Vaccinium macrocarpon
vmacro22130 Vaccinium macrocarpon
VMungo0720G1738 Vigna mungo
Zm00001eb302830 Zea mays
Zm00001eb302870 Zea mays

User provided reference genes

Program Settings